RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 CDC42EP4Q9H3Q1 356 aaKnown RBP16.96■□□□□ 0.31
CD9-211ENST00000546073 ACTR10Q9NZ32 417 aa16.96■□□□□ 0.31
CD9-211ENST00000546073 NINJ2Q9NZG7 142 aa16.96■□□□□ 0.31
CD9-211ENST00000546073 OGFRQ9NZT2 677 aa16.96■□□□□ 0.31
CD9-211ENST00000546073 TMEM9Q9P0T7 183 aa16.96■□□□□ 0.31
CD9-211ENST00000546073 SLC17A6Q9P2U8 582 aa16.96■□□□□ 0.31
CD9-211ENST00000546073 TLK1Q9UKI8 766 aa16.96■□□□□ 0.31
CD9-211ENST00000546073 B4E171 279 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 POLR1CO15160 346 aaPredicted RBP16.95■□□□□ 0.3
CD9-211ENST00000546073 PSIP1O75475 530 aaKnown RBP16.95■□□□□ 0.3
CD9-211ENST00000546073 KRT38O76015 456 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 FKBP9O95302 570 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 F7P08709 466 aaPredicted RBP16.95■□□□□ 0.3
CD9-211ENST00000546073 CHRM5P08912 532 aaPredicted RBP16.95■□□□□ 0.3
CD9-211ENST00000546073 FDXRP22570 491 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 PRDX3P30048 256 aaKnown RBP16.95■□□□□ 0.3
CD9-211ENST00000546073 TSPAN7P41732 249 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 CDKN2DP55273 166 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 CAMK2BQ13554 666 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 ARHGAP19Q14CB8 494 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 SF1Q15637 639 aaKnown RBP16.95■□□□□ 0.3
CD9-211ENST00000546073 THEMIS2Q5TEJ8 643 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 FBXO38Q6PIJ6 1188 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 FRA10AC1Q70Z53 315 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 ARHGAP22Q7Z5H3 698 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 CCDC91Q7Z6B0 441 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 BPHLQ86WA6 291 aaPredicted RBP16.95■□□□□ 0.3
CD9-211ENST00000546073 OR2L8Q8NGY9 312 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 EEF1AKMT1Q8WVE0 214 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 ZCCHC14Q8WYQ9 949 aaKnown RBP16.95■□□□□ 0.3
CD9-211ENST00000546073 FGF11Q92914 225 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 TSNARE1Q96NA8 513 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 SLC46A1Q96NT5 459 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 B3GNT4Q9C0J1 378 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 ZNF768Q9H5H4 540 aaKnown RBP16.95■□□□□ 0.3
CD9-211ENST00000546073 PLAC1Q9HBJ0 212 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 GALPQ9UBC7 116 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 PLAGL1Q9UM63 463 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 ICKQ9UPZ9 632 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 PSAT1Q9Y617 370 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 NFS1Q9Y697 457 aa16.95■□□□□ 0.3
CD9-211ENST00000546073 ARHGEF17Q96PE2 2063 aaPredicted RBP16.94■□□□□ 0.3
CD9-211ENST00000546073 BTN3A1O00481 513 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 BRINP1O60477 761 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 CCNDBP1O95273 360 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 TUBBP07437 444 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 CD82P27701 267 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 CRABP2P29373 138 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 PKLRP30613 574 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 RPA3P35244 121 aaPredicted RBP16.94■□□□□ 0.3
CD9-211ENST00000546073 BDKRB1P46663 353 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 SERPINB9P50453 376 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 PDX1P52945 283 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 CFHR1Q03591 330 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 GBX1Q14549 363 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 C16orf72Q14CZ0 275 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 IGF2-ASQ6U949 168 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 XKR5Q6UX68 686 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 TMPRSS9Q7Z410 1059 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 TBC1D1Q86TI0 1168 aaPredicted RBP16.94■□□□□ 0.3
CD9-211ENST00000546073 SYTL1Q8IYJ3 562 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 ATL1Q8WXF7 558 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 ASB11Q8WXH4 323 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 SMPDL3AQ92484 453 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 CCDC138Q96M89 665 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 MAP3K3Q99759 626 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 SLC7A5P2Q9GIP4 190 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 ACSS3Q9H6R3 686 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 PARVBQ9HBI1 364 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 DKK4Q9UBT3 224 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 POMT2Q9UKY4 750 aa16.94■□□□□ 0.3
CD9-211ENST00000546073 EXOC1LA0A1B0GW35 172 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 C1QTNF9BB2RNN3 333 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 BTN3A3O00478 584 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 DXOO77932 396 aaKnown RBP16.93■□□□□ 0.3
CD9-211ENST00000546073 ENO2P09104 434 aaPredicted RBP16.93■□□□□ 0.3
CD9-211ENST00000546073 C1QTNF9P0C862 333 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 NELFEP18615 380 aaKnown RBP16.93■□□□□ 0.3
CD9-211ENST00000546073 CNTFP26441 200 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 OAS2P29728 719 aaKnown RBP16.93■□□□□ 0.3
CD9-211ENST00000546073 PCBP4P57723 403 aaKnown RBP16.93■□□□□ 0.3
CD9-211ENST00000546073 IL11RAQ14626 422 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 SLC5A12Q1EHB4 618 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 TAF1BQ53T94 588 aaPredicted RBP16.93■□□□□ 0.3
CD9-211ENST00000546073 SPESP1Q6UW49 350 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 PIWIL4Q7Z3Z4 852 aaKnown RBP16.93■□□□□ 0.3
CD9-211ENST00000546073 RASGRP3Q8IV61 690 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 FBXO15Q8NCQ5 510 aaPredicted RBP16.93■□□□□ 0.3
CD9-211ENST00000546073 ANKRD7Q92527 254 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 GATA6Q92908 595 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 USP7Q93009 1102 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 DDA1Q9BW61 102 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 FBXO8Q9NRD0 319 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 IRAK4Q9NWZ3 460 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 CTNNAL1Q9UBT7 734 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 RARRES3Q9UL19 164 aa16.93■□□□□ 0.3
CD9-211ENST00000546073 RUVBL2Q9Y230 463 aaKnown RBP16.93■□□□□ 0.3
CD9-211ENST00000546073 A0A0J9YY10 115 aa16.92■□□□□ 0.3
CD9-211ENST00000546073 CXorf49A8MYA2 514 aaPredicted RBP16.92■□□□□ 0.3
CD9-211ENST00000546073 POC1B-GALNT4F8VUJ3 575 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms