RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 ZNHIT6Q9NWK9 470 aaKnown RBP16.05■□□□□ 0.16
CPSF7-225ENST00000545934 OR6C2Q9NZP2 312 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 FEZ2Q9UHY8 353 aaPredicted RBP16.05■□□□□ 0.16
CPSF7-225ENST00000545934 ENTPD4Q9Y227 616 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 OTOGQ6ZRI0 2925 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 SVILO95425 2214 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 CSMD2Q7Z408 3487 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 SOCS6O14544 535 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 LIN7AO14910 233 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-225ENST00000545934 LRRTM2O43300 516 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 AP2A2O94973 939 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 EDN3P14138 238 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 POU3F2P20265 443 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-225ENST00000545934 HIF1AQ16665 826 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 PRAMEF13Q5VWM6 474 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 B3GNTL1Q67FW5 361 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-225ENST00000545934 HOOK3Q86VS8 718 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 SRRM1Q8IYB3 904 aaKnown RBP16.04■□□□□ 0.16
CPSF7-225ENST00000545934 PIANPQ8IYJ0 282 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 TBC1D21Q8IYX1 336 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 OR5K2Q8NHB8 316 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 GRHL3Q8TE85 626 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 COG1Q8WTW3 980 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 ANP32EQ9BTT0 268 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 NDC1Q9BTX1 674 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 WDR54Q9H977 334 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 TXLNGQ9NUQ3 528 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 NLE1Q9NVX2 485 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-225ENST00000545934 POLG2Q9UHN1 485 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 FBXL4Q9UKA2 621 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 PLCL2Q9UPR0 1127 aa16.04■□□□□ 0.16
CPSF7-225ENST00000545934 SLC5A10A0PJK1 596 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 BHMG1C9JSJ3 638 aaPredicted RBP16.03■□□□□ 0.16
CPSF7-225ENST00000545934 H7C0C1 242 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 HNRNPRO43390 633 aaKnown RBP16.03■□□□□ 0.16
CPSF7-225ENST00000545934 PSMA3P25788 255 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 ITGA3P26006 1051 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 ELAVL4P26378 380 aaKnown RBP16.03■□□□□ 0.16
CPSF7-225ENST00000545934 ATP5OP48047 213 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 PER3P56645 1201 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 PRPSAP1Q14558 356 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 DBN1Q16643 649 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 OVCH1Q7RTY7 1134 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 CCDC50Q8IVM0 306 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 ACTL9Q8TC94 416 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 FAR1Q8WVX9 515 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 KRT35Q92764 455 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 MARVELD3Q96A59 401 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 SPSB2Q99619 263 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 TBL1YQ9BQ87 522 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 HEMGNQ9BXL5 484 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 SLC26A1Q9H2B4 701 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 EURLQ9NYK6 297 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 OSGIN2Q9Y236 505 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 ASF1AQ9Y294 204 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 HS3ST3B1Q9Y662 390 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 PRSS21Q9Y6M0 314 aa16.03■□□□□ 0.16
CPSF7-225ENST00000545934 AKAP9Q99996 3911 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 CNTRLQ7Z7A1 2325 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 MFAP3LO75121 409 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 ALOX12BO75342 701 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 AP2A1O95782 977 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 ALBP02768 609 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 TPM3P06753 285 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 OTUD4Q01804 1114 aaKnown RBP16.02■□□□□ 0.16
CPSF7-225ENST00000545934 ZNF169Q14929 603 aaPredicted RBP16.02■□□□□ 0.16
CPSF7-225ENST00000545934 KIR2DS3Q14952 304 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 NKG7Q16617 165 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 AGAP7PQ5VUJ5 663 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 KCTD11Q693B1 232 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 KIRREL2Q6UWL6 708 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 PACS1Q6VY07 963 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 COX15Q7KZN9 410 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 CDKL3Q8IVW4 592 aaPredicted RBP16.02■□□□□ 0.16
CPSF7-225ENST00000545934 CDKN2AIPNLQ96HQ2 116 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 SPATA13Q96N96 652 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 AGAP4Q96P64 663 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 PPP1R2P1Q96PQ5 205 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 SLX1AQ9BQ83 275 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 MENTQ9BUN1 341 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 EFR3BQ9Y2G0 817 aa16.02■□□□□ 0.16
CPSF7-225ENST00000545934 FBN2P35556 2912 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 A0A1B0GX78 115 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 STSP08842 583 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 RBP3P10745 1247 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 NSG1P42857 185 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 ARSFP54793 590 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 COPS2P61201 443 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 CACNG1Q06432 222 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 SPARCL1Q14515 664 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 ITIH4Q14624 930 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 C11orf63Q6NUN7 778 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 RPUSD3Q6P087 351 aaKnown RBP16.01■□□□□ 0.15
CPSF7-225ENST00000545934 VSTM4Q8IW00 320 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 DNAJB14Q8TBM8 379 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 CCDC110Q8TBZ0 833 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 DLG3Q92796 817 aa16.01■□□□□ 0.15
CPSF7-225ENST00000545934 TRIM56Q9BRZ2 755 aaKnown RBP16.01■□□□□ 0.15
CPSF7-225ENST00000545934 TDRKHQ9Y2W6 561 aaKnown RBP16.01■□□□□ 0.15
CPSF7-225ENST00000545934 MYO7BQ6PIF6 2116 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms