RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZNF300Q96RE9 604 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-224ENST00000545688 CLEC7AQ9BXN2 247 aa4.03□□□□□ -1.76
SNHG1-224ENST00000545688 SLC7A10Q9NS82 523 aa4.03□□□□□ -1.76
SNHG1-224ENST00000545688 OLA1Q9NTK5 396 aaKnown RBP4.03□□□□□ -1.76
SNHG1-224ENST00000545688 LRWD1Q9UFC0 647 aa4.03□□□□□ -1.76
SNHG1-224ENST00000545688 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.03□□□□□ -1.76
SNHG1-224ENST00000545688 KDM5DQ9BY66 1539 aa4.03□□□□□ -1.76
SNHG1-224ENST00000545688 FMN1Q68DA7 1419 aa4.03□□□□□ -1.76
SNHG1-224ENST00000545688 DHX29Q7Z478 1369 aaKnown RBP4.02□□□□□ -1.77
SNHG1-224ENST00000545688 SYNMO15061 1565 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 ASTN2O75129 1339 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-224ENST00000545688 FAM135AQ9P2D6 1515 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 SETD1AO15047 1707 aaKnown RBP4.02□□□□□ -1.77
SNHG1-224ENST00000545688 KLF11O14901 512 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 CLDN1O95832 211 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 SCGB1D1O95968 90 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 GATA2P23769 480 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-224ENST00000545688 SUOXP51687 545 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 SLC8A3P57103 927 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 CX3CL1P78423 397 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 SETQ01105 290 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-224ENST00000545688 PRKCZQ05513 592 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 DMPKQ09013 629 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 SGSM1Q2NKQ1 1148 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 MDH1BQ5I0G3 518 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 TCTEX1D4Q5JR98 221 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 SH2D6Q7Z4S9 175 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 FAM114A1Q8IWE2 563 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 MCEMP1Q8IX19 187 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 LSMEM2Q8N112 164 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 AMER3Q8N944 861 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 SCFD2Q8WU76 684 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 DYRK2Q92630 601 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 CEP295NLQ96MC4 621 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 C16orf70Q9BSU1 422 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 ARRDC1-AS1Q9H2J1 176 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 EXO1Q9UQ84 846 aaKnown RBP4.02□□□□□ -1.77
SNHG1-224ENST00000545688 EP400Q96L91 3159 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 ARHGAP23Q9P227 1491 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 CLTCQ00610 1675 aaKnown RBP4.02□□□□□ -1.77
SNHG1-224ENST00000545688 ITSN2Q9NZM3 1697 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 ZNF318Q5VUA4 2279 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 RTEL1-TNFRSF6BF6WH68 1400 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 PREX2Q70Z35 1606 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 JCADQ9P266 1359 aa4.02□□□□□ -1.77
SNHG1-224ENST00000545688 POLR1AO95602 1720 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 ATP7AQ04656 1500 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 GPATCH8Q9UKJ3 1502 aaKnown RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 ZC3H13Q5T200 1668 aaKnown RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 NCOA2Q15596 1464 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 ARHGAP35Q9NRY4 1499 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 MBD5Q9P267 1494 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 GAPDHSO14556 408 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 PI15O43692 258 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 SSX4O60224 188 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 TRIM49P0CI25 452 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 TRIM49CP0CI26 452 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 MMP9P14780 707 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 SHC1P29353 583 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 TM4SF1P30408 202 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 MAPK4P31152 587 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 MAMLD1Q13495 774 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 UGP2Q16851 508 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 FASTKD1Q53R41 847 aaKnown RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 INTS8Q75QN2 995 aaKnown RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 EXOC8Q8IYI6 725 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 ZFAND2BQ8WV99 257 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 FUCA2Q9BTY2 467 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 PPIL3Q9H2H8 161 aaKnown RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 CHMP1AQ9HD42 196 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 SDR39U1Q9NRG7 319 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 OSER1Q9NX31 292 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 ERAP1Q9NZ08 941 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 ZDHHC2Q9UIJ5 367 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 LRP6O75581 1613 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 CLIP1P30622 1438 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 FGD6Q6ZV73 1430 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 UGGT1Q9NYU2 1555 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 INO80Q9ULG1 1556 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-224ENST00000545688 TMEM94Q12767 1356 aa4.01□□□□□ -1.77
SNHG1-224ENST00000545688 MAP3K1Q13233 1512 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 IQGAP1P46940 1657 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 XIRP1Q702N8 1843 aaKnown RBP4□□□□□ -1.77
SNHG1-224ENST00000545688 MSGN1A6NI15 193 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 CDRT15L2A8MXV6 281 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 DRP2Q13474 957 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 GRAPQ13588 217 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 KRT33BQ14525 404 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 KLHL26Q53HC5 615 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 BSPRYQ5W0U4 402 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 LACC1Q8IV20 430 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 TRIML1Q8N9V2 468 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 OR5AP2Q8NGF4 316 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 OR6C1Q96RD1 312 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 FNBP1Q96RU3 617 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 FTOQ9C0B1 505 aaKnown RBP eCLIP4□□□□□ -1.77
SNHG1-224ENST00000545688 ATP13A3Q9H7F0 1226 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 KRT84Q9NSB2 600 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 ZHX2Q9Y6X8 837 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 SLIT1O75093 1534 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms