RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	RPS6KA1	Q15418	735 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	GPR33	Q49SQ1	333 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	DCAF12	Q5T6F0	453 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	ARHGAP40	Q5TG30	622 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	METRNL	Q641Q3	311 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	TMEM220	Q6QAJ8	160 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	PRSS42	Q7Z5A4	293 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	LRRC8A	Q8IWT6	810 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	LRRN4CL	Q8ND94	238 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	TRIM58	Q8NG06	486 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	GPR150	Q8NGU9	434 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	OR2L2	Q8NH16	312 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	HM13	Q8TCT9	377 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	STYX	Q8WUJ0	223 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	KLHL6	Q8WZ60	621 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	NCSTN	Q92542	709 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	RSC1A1	Q92681	617 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	ART4	Q93070	314 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	WBP1	Q96G27	269 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	DCUN1D1	Q96GG9	259 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	DNAJC1	Q96KC8	554 aa	Known RBP	7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	C9orf72	Q96LT7	481 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	COPS8	Q99627	209 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	ZPBP	Q9BS86	351 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	PIF1	Q9H611	641 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	VPS37B	Q9H9H4	285 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	FBXO8	Q9NRD0	319 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	NLE1	Q9NVX2	485 aa	Predicted RBP	7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	OCIAD1	Q9NX40	245 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	SIDT1	Q9NXL6	827 aa	Known RBP	7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	PFDN2	Q9UHV9	154 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	ACSL5	Q9ULC5	683 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	WDR37	Q9Y2I8	494 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	ZKSCAN5	Q9Y2L8	839 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	KCTD3	Q9Y597	815 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	B3GALT1	Q9Y5Z6	326 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	SLC30A1	Q9Y6M5	507 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	MDC1	Q14676	2089 aa	Known RBP	7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	BAHCC1	Q9P281	2608 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	C17orf113	A0A1B0GUU1	675 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	MROH6	A6NGR9	719 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	EIF4E1B	A6NMX2	242 aa	Known RBP	7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	CCL22	O00626	93 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	SGTA	O43765	313 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	GAS8	O95995	478 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	GSTM1	P09488	218 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	SLC35G4	P0C7Q5	338 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	AMD1	P17707	334 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	ACRV1	P26436	265 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	PBLD	P30039	288 aa	Predicted RBP	7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	TMPRSS15	P98073	1019 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	MC2R	Q01718	297 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	CACNG1	Q06432	222 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	CDH17	Q12864	832 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	SEMA5A	Q13591	1074 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	LAMB3	Q13751	1172 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	POU6F1	Q14863	301 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	SIX1	Q15475	284 aa	Predicted RBP	7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	TGIF1	Q15583	401 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	RPE65	Q16518	533 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	MANEA	Q5SRI9	462 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	ANKS6	Q68DC2	871 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	CYB5D1	Q6P9G0	228 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	KLHL35	Q6PF15	583 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	DRICH1	Q6PGQ1	229 aa	Predicted RBP	7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	CEACAM20	Q6UY09	585 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	DET1	Q7L5Y6	550 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	ZFAND4	Q86XD8	727 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	CCDC89	Q8N998	374 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	ZFPM2	Q8WW38	1151 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	PEX13	Q92968	403 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	SGF29	Q96ES7	293 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	ZDHHC12	Q96GR4	267 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	SPOCK3	Q9BQ16	436 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	ZNF768	Q9H5H4	540 aa	Known RBP	7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	GP6	Q9HCN6	339 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	LZTFL1	Q9NQ48	299 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	EIF2B3	Q9NR50	452 aa	Known RBP	7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	IMP3	Q9NV31	184 aa	Known RBP	7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	SLC39A1	Q9NY26	324 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	PAK5	Q9P286	719 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	EPHA6	Q9UF33	1036 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	ZNF148	Q9UQR1	794 aa		7.49	□□□□□ -1.21
SNHG1-223	ENST00000545440	HEATR9	A2RTY3	570 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440		A8MU76	341 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440		E7EVH7	732 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	QSOX1	O00391	747 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	AP2A2	O94973	939 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	IFNB1	P01574	187 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	ITGB2	P05107	769 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	ATP1B2	P14415	290 aa	Predicted RBP	7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	TYRP1	P17643	537 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	NDUFS1	P28331	727 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	NSG1	P42857	185 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	LEPR	P48357	1165 aa	Known RBP	7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	CLCN7	P51798	805 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	ITIH4	Q14624	930 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	PLCL1	Q15111	1095 aa		7.48	□□□□□ -1.21
SNHG1-223	ENST00000545440	CCNG2	Q16589	344 aa		7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms