RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 WDR37Q9Y2I8 494 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 TDRKHQ9Y2W6 561 aaKnown RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 CFAP20Q9Y6A4 193 aaKnown RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 CACNA1IQ9P0X4 2223 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 A0A0G2JND7 137 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 VILLO15195 856 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 KATNA1O75449 491 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 SLC16A8O95907 504 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 OTCP00480 354 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 MTHFD1P11586 935 aaKnown RBP13.4□□□□□ -0.26
SCARB1-209ENST00000545305 SLC2A4P14672 509 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 EPB42P16452 691 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 TSPAN8P19075 237 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 NDUFS1P28331 727 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 CNR2P34972 360 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 HSD17B2P37059 387 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 SLC6A12P48065 614 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 PKNOX1P55347 436 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 NXPH1P58417 271 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 SRSF5Q13243 272 aaKnown RBP13.4□□□□□ -0.26
SCARB1-209ENST00000545305 RPE65Q16518 533 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 PTCHD3Q3KNS1 767 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 CCSMST1Q4G0I0 132 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 ZNF542PQ5EBM4 170 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 DUS1LQ6P1R4 473 aaKnown RBP13.4□□□□□ -0.26
SCARB1-209ENST00000545305 AGTRAPQ6RW13 159 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 ABRAXAS1Q6UWZ7 409 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 LAYNQ6UX15 382 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 GPRIN3Q6ZVF9 776 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 RFWD2Q8NHY2 731 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 C1orf216Q8TAB5 229 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 GPBAR1Q8TDU6 330 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 AGAP11Q8TF27 550 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 CXorf40BQ96DE9 158 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 SEC16BQ96JE7 1060 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 ZNF382Q96SR6 550 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 RAB11FIP5Q9BXF6 653 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 ATG10Q9H0Y0 220 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 DNAJC11Q9NVH1 559 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 TBC1D29Q9UFV1 150 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 LNPEPQ9UIQ6 1025 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 DCTN4Q9UJW0 460 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 PCOLCE2Q9UKZ9 415 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 ARL2BPQ9Y2Y0 163 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 ASB1Q9Y576 335 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 USH1CQ9Y6N9 552 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 COLEC10Q9Y6Z7 277 aa13.4□□□□□ -0.26
SCARB1-209ENST00000545305 THADAQ6YHU6 1953 aa13.4□□□□□ -0.27
SCARB1-209ENST00000545305 ATXN2Q99700 1313 aaKnown RBP13.39□□□□□ -0.27
SCARB1-209ENST00000545305 NCOR1O75376 2440 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 A0A1B0GTW7 788 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 KRT87PA6NCN2 255 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 CSF2P04141 144 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 F3P13726 295 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 NME1P15531 152 aaKnown RBP13.39□□□□□ -0.27
SCARB1-209ENST00000545305 ITPKAP23677 461 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 IMPA1P29218 277 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 GDF5P43026 501 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 CCNG1P51959 295 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 ARFIP2P53365 341 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 PNLIPRP1P54315 467 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 PRKG2Q13237 762 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 NAE1Q13564 534 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 ARHGAP19Q14CB8 494 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 CLCA4Q14CN2 919 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 ELOCQ15369 112 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 ZNF528Q3MIS6 628 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 PLK5Q496M5 336 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 PRRT3Q5FWE3 981 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 CAPN13Q6MZZ7 669 aaPredicted RBP13.39□□□□□ -0.27
SCARB1-209ENST00000545305 EFL1Q7Z2Z2 1120 aaKnown RBP13.39□□□□□ -0.27
SCARB1-209ENST00000545305 TAF8Q7Z7C8 310 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 SPATS2Q86XZ4 545 aaKnown RBP13.39□□□□□ -0.27
SCARB1-209ENST00000545305 TRIM48Q8IWZ4 208 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 HOMEZQ8IX15 550 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 KLHDC8AQ8IYD2 350 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 CCL4L1Q8NHW4 92 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 MED8Q96G25 268 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 TMEM120AQ9BXJ8 343 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 TCEAL2Q9H3H9 227 aaPredicted RBP13.39□□□□□ -0.27
SCARB1-209ENST00000545305 STN1Q9H668 368 aaKnown RBP13.39□□□□□ -0.27
SCARB1-209ENST00000545305 NOL11Q9H8H0 719 aaKnown RBP13.39□□□□□ -0.27
SCARB1-209ENST00000545305 IPPKQ9H8X2 491 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 ZSCAN32Q9NX65 697 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 KCNK4Q9NYG8 393 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 SPASTQ9UBP0 616 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 CIDEBQ9UHD4 219 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 ZDHHC2Q9UIJ5 367 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 FIS1Q9Y3D6 152 aa13.39□□□□□ -0.27
SCARB1-209ENST00000545305 TRPC5OSA6NMA1 111 aa13.38□□□□□ -0.27
SCARB1-209ENST00000545305 OR52A4PA6NMU1 304 aa13.38□□□□□ -0.27
SCARB1-209ENST00000545305 UBFD1O14562 309 aaKnown RBP13.38□□□□□ -0.27
SCARB1-209ENST00000545305 AZIN1O14977 448 aa13.38□□□□□ -0.27
SCARB1-209ENST00000545305 HDAC3O15379 428 aa13.38□□□□□ -0.27
SCARB1-209ENST00000545305 ESRRBO95718 433 aa13.38□□□□□ -0.27
SCARB1-209ENST00000545305 CHEK2O96017 543 aa13.38□□□□□ -0.27
SCARB1-209ENST00000545305 ENO1P06733 434 aaKnown RBP13.38□□□□□ -0.27
SCARB1-209ENST00000545305 ALOX15P16050 662 aaPredicted RBP13.38□□□□□ -0.27
SCARB1-209ENST00000545305 CCND1P24385 295 aa13.38□□□□□ -0.27
SCARB1-209ENST00000545305 AVPR2P30518 371 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms