RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 RDH14Q9HBH5 336 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 EVA1BQ9NVM1 165 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 ZNF358Q9NW07 568 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 LRIT1Q9P2V4 623 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 DCDC2Q9UHG0 476 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 PDE10AQ9Y233 779 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 OARD1Q9Y530 152 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 ACTL7BQ9Y614 415 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 FAM221BA6H8Z2 402 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 GLRA3O75311 464 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 MYF5P13349 255 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 CRHR1P34998 444 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 KCNC1P48547 511 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 EPHA4P54764 986 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 AP1S2P56377 157 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 OR4D1Q15615 310 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 AGBL2Q5U5Z8 902 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 GUSBP11Q6P575 273 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 KLC3Q6P597 504 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 TTC23LQ6PF05 361 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 CDHR3Q6ZTQ4 885 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
DDX11-227ENST00000544652 TMEM151AQ8N4L1 468 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 BANPQ8N9N5 519 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 OR52E1Q8NGJ3 308 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 OR9A1PQ8NGU1 263 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 STAG3L4Q8TBR4 150 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 MCOLN3Q8TDD5 553 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 ALKBH8Q96BT7 664 aaKnown RBP12.71□□□□□ -0.37
DDX11-227ENST00000544652 TLCD1Q96CP7 247 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 CDC6Q99741 560 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 HGH1Q9BTY7 390 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 UNKQ9C0B0 810 aaKnown RBP12.71□□□□□ -0.37
DDX11-227ENST00000544652 STMN4Q9H169 189 aaPredicted RBP12.71□□□□□ -0.37
DDX11-227ENST00000544652 SSU72Q9NP77 194 aaKnown RBP12.71□□□□□ -0.37
DDX11-227ENST00000544652 TMEM216Q9P0N5 145 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 SPATA7Q9P0W8 599 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 FTSJ1Q9UET6 329 aa12.71□□□□□ -0.37
DDX11-227ENST00000544652 GOLGA6L10A6NI86 522 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 RHPN2P1A8MT19 583 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 TARM1B6A8C7 271 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 SLC30A4O14863 429 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 TNFSF14O43557 240 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 KDM1AO60341 852 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 KERAO60938 352 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 GP1BAP07359 652 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 RBP1P09455 135 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 HIST1H2AGP0C0S8 130 aaPredicted RBP12.7□□□□□ -0.38
DDX11-227ENST00000544652 CREB1P16220 341 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 HIST1H2ADP20671 130 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
DDX11-227ENST00000544652 MAP4P27816 1152 aaKnown RBP12.7□□□□□ -0.38
DDX11-227ENST00000544652 SHMT2P34897 504 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 CCT5P48643 541 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 KPNA2P52292 529 aaKnown RBP12.7□□□□□ -0.38
DDX11-227ENST00000544652 DAB2P98082 770 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 PRKG2Q13237 762 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 KRT33BQ14525 404 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 ARHGAP19Q14CB8 494 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 TGFBIQ15582 683 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 CDKL4Q5MAI5 379 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 PERM1Q5SV97 790 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 C4orf33Q8N1A6 199 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 HMGCLL1Q8TB92 370 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 DENND1AQ8TEH3 1009 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 CCDC74AQ96AQ1 378 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 APOPT1Q96IL0 206 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 HIST1H2AHQ96KK5 128 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 CCDC138Q96M89 665 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 PKP4Q99569 1192 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 SLC38A3Q99624 504 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 HIST1H2AJQ99878 128 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 H2AFJQ9BTM1 129 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 RAB11FIP5Q9BXF6 653 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 TRIM54Q9BYV2 358 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 ALG9Q9H6U8 611 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 ICKQ9UPZ9 632 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 FAM186AA6NE01 2351 aa12.7□□□□□ -0.38
DDX11-227ENST00000544652 COPEO14579 308 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 B4GAT1O43505 415 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 TYROBPO43914 113 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 KLK8O60259 260 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 OPA1O60313 960 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 SBK3P0C264 359 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 MTHFD2P13995 350 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 IMPA1P29218 277 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 PKLRP30613 574 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 HSD17B2P37059 387 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 GLRBP48167 497 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 ACADVLP49748 655 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 RAB28P51157 221 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 GPLD1P80108 840 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 SQSTM1Q13501 440 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 CYP2A13Q16696 494 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 EFL1Q7Z2Z2 1120 aaKnown RBP12.69□□□□□ -0.38
DDX11-227ENST00000544652 SPRED1Q7Z699 444 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 AMIGO1Q86WK6 493 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 LRRC56Q8IYG6 542 aaPredicted RBP12.69□□□□□ -0.38
DDX11-227ENST00000544652 PDPRQ8NCN5 879 aa12.69□□□□□ -0.38
DDX11-227ENST00000544652 OR2L8Q8NGY9 312 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms