RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CFAP61Q8NHU2 1237 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 APOBEC4Q8WW27 367 aaKnown RBP5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 THAP4Q8WY91 577 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 RSC1A1Q92681 617 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 SLCO2A1Q92959 643 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 NKD1Q969G9 470 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 ZUFSPQ96AP4 578 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 CLIP3Q96DZ5 547 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 MED8Q96G25 268 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 VPS39Q96JC1 886 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 LRFN5Q96NI6 719 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 MAP3K3Q99759 626 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 EBNA1BP2Q99848 306 aaKnown RBP5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 HGH1Q9BTY7 390 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 DHRS4Q9BTZ2 278 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 NLNQ9BYT8 704 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 TRIM54Q9BYV2 358 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 TSPYL1Q9H0U9 437 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 CPNE5Q9HCH3 593 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 PPANQ9NQ55 473 aaKnown RBP5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 FGF21Q9NSA1 209 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 TREX1Q9NSU2 369 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 C20orf96Q9NUD7 363 aaPredicted RBP5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 TXLNGQ9NUQ3 528 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 OCIAD1Q9NX40 245 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 TAS2R13Q9NYV9 303 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 FOXJ2Q9P0K8 574 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 TMEM9Q9P0T7 183 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 SPATA7Q9P0W8 599 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 TXNDC16Q9P2K2 825 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 POMT2Q9UKY4 750 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 CORO1CQ9ULV4 474 aaPredicted RBP5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 POLHQ9Y253 713 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 BTRCQ9Y297 605 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 SSUH2Q9Y2M2 353 aa5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 UTP11Q9Y3A2 253 aaKnown RBP5.44□□□□□ -1.54
CLSTN3-215ENST00000544584 IGHV5-51A0A0C4DH38 117 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 A0A0U1RQJ8 604 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SLC5A10A0PJK1 596 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SLC9B1P1A6NJY1 282 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 TARM1B6A8C7 271 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 TMEM150CB9EJG8 249 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 MKRN2OSH3BPM6 223 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 AGRPO00253 132 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 CCL22O00626 93 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 PRPF4O43172 522 aaKnown RBP eCLIP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 GPR39O43194 453 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 OR1I1O60431 355 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 KATNA1O75449 491 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 CHRM5P08912 532 aaPredicted RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 HIST1H2AGP0C0S8 130 aaPredicted RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 ATXN8OSP0DMR3 200 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 ERVK-10P10266 1014 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 HIST1H2ADP20671 130 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 CCND1P24385 295 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 VARSP26640 1264 aaKnown RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 CMPK1P30085 196 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 FMO4P31512 558 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 DLSTP36957 453 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 ETV5P41161 510 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 STAT5AP42229 794 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 LEPRP48357 1165 aaKnown RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 CDKN1CP49918 316 aaPredicted RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 ARSDP51689 593 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 KPNA2P52292 529 aaKnown RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SKP1P63208 163 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 CKAP4Q07065 602 aaKnown RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 ABRQ12979 859 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 PRKG2Q13237 762 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SIX1Q15475 284 aaPredicted RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SF1Q15637 639 aaKnown RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SLC5A12Q1EHB4 618 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SPANXN3Q5MJ09 141 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 PAPD7Q5XG87 772 aaKnown RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 ZNF470Q6ECI4 717 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 TMPRSS9Q7Z410 1059 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 TMEM135Q86UB9 458 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 KCNMB4Q86W47 210 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 HPS6Q86YV9 775 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 CILP2Q8IUL8 1156 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 BMPERQ8N8U9 685 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 C19orf47Q8N9M1 422 aaKnown RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 MNS1Q8NEH6 495 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SPDYE1Q8NFV5 336 aaPredicted RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 PROKR1Q8TCW9 393 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 MCOLN3Q8TDD5 553 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 TTC9Q92623 222 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 CDKL2Q92772 493 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 KCNJ9Q92806 393 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 NACC2Q96BF6 587 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 ZNF669Q96BR6 464 aaPredicted RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 TRIM44Q96DX7 344 aaPredicted RBP5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 MFSD3Q96ES6 412 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SNF8Q96H20 258 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 MS4A14Q96JA4 679 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 PDLIM2Q96JY6 352 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 HIST1H2AHQ96KK5 128 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 RMDN2Q96LZ7 410 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 SERPINB12Q96P63 405 aa5.43□□□□□ -1.54
CLSTN3-215ENST00000544584 HIST1H2AJQ99878 128 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms