RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 GDI2P50395 445 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 FAM76BQ5HYJ3 339 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 GJD3Q8N144 294 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 OR10G2Q8NGC3 310 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 OR5AK3PQ8NH89 298 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 WTIPA6NIX2 430 aaPredicted RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 RENP00797 406 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 CST3P01034 146 aaPredicted RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 RPL19P84098 196 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 TMEM220Q6QAJ8 160 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 PLPPR4Q7Z2D5 763 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 TMEM199Q8N511 208 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 PRMT3O60678 531 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 ASLP04424 464 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 CD2P06729 351 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 SLC35G6P0C7Q6 338 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 KELP23276 732 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 GBX2P52951 348 aaPredicted RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 SLC3A1Q07837 685 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 XKR4Q5GH76 650 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 NUP54Q7Z3B4 507 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 ZNF676Q8N7Q3 588 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 SDCBP2Q9H190 292 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 FARSBQ9NSD9 589 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 FBXL3Q9UKT7 428 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 A0A1W2PRQ8 180 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 WNT7AO00755 349 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 RPS14P62263 151 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 HERC3Q15034 1050 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 SYVN1Q86TM6 617 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 ZNF598Q86UK7 904 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 MPP5Q8N3R9 675 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 LCN9Q8WX39 176 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 NXPE2Q96DL1 559 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 KCTD7Q96MP8 289 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 POLR2J3Q9H1A7 115 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 TSPAN1O60635 241 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 MMP8P22894 467 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 MAT2AP31153 395 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 SLC6A9P48067 706 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 ACSBG2Q5FVE4 666 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 FAM182AQ5T1J6 154 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 METTL21CQ5VZV1 264 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 TTPALQ9BTX7 342 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 RCOR3Q9P2K3 495 aaPredicted RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 J3QRK9 145 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 GDF10P55107 478 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 RASGEF1BQ0VAM2 473 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 TUSC3Q13454 348 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 GRIK5Q16478 980 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 TSTQ16762 297 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 NADK2Q4G0N4 442 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 HFE2Q6ZVN8 426 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 TMPRSS9Q7Z410 1059 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 FBXL8Q96CD0 374 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 BEX2Q9BXY8 128 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 RNF38Q9H0F5 515 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 BEX1Q9HBH7 125 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 C1orf109Q9NX04 203 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 FARSAQ9Y285 508 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 RPL36Q9Y3U8 105 aaKnown RBP15.17■□□□□ 0.02
CHD4-210ENST00000544040 NR2E3Q9Y5X4 410 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 NRXN1Q9ULB1 1477 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 OPN1SWP03999 348 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 APODP05090 189 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 SLC6A4P31645 630 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 RBM48Q5RL73 367 aaKnown RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 TSTD2Q5T7W7 516 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 TMED4Q7Z7H5 227 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 LRRC52Q8N7C0 313 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 SLC37A3Q8NCC5 494 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 HDAC2Q92769 488 aaKnown RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 DPEP2Q9H4A9 486 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 RNF17Q9BXT8 1623 aaKnown RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 KLRG2A4D1S0 409 aaPredicted RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 TLL1O43897 1013 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 PRPF38BQ5VTL8 546 aaKnown RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 PROKR2Q8NFJ6 384 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 SEC14L1Q92503 715 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 C12orf43Q96C57 262 aaKnown RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 ZNF347Q96SE7 839 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 CENPMQ9NSP4 180 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 POLR3BQ9NW08 1133 aaPredicted RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 FAM237AA0A1B0GTK4 181 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 C2orf92A0A1B0GVN3 265 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 GPR89AB7ZAQ6 455 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 MEN1O00255 615 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 GLUD1P00367 558 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 GPR89BP0CG08 455 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 CCNCP24863 283 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 AFF1P51825 1210 aaKnown RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 PPP1R8Q12972 351 aaKnown RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 CRB2Q5IJ48 1285 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 KLK6Q92876 244 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 SLC7A6OSQ96CW6 309 aaPredicted RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 DUSP26Q9BV47 211 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 FAM83DQ9H4H8 585 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 COPS7AQ9UBW8 275 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms