RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TXLNGYQ9BZA5 131 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 CENPHQ9H3R5 247 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 TFB2MQ9H5Q4 396 aaKnown RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 PPCSQ9HAB8 311 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 PARVBQ9HBI1 364 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 NMRAL1Q9HBL8 299 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 PRM3Q9NNZ6 103 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 SNX15Q9NRS6 342 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 ARL15Q9NXU5 204 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 UTP6Q9NYH9 597 aaKnown RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 SPATA7Q9P0W8 599 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 ZNF180Q9UJW8 692 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 RAB21Q9UL25 225 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 RNF112Q9ULX5 631 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 ICKQ9UPZ9 632 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 PLAAQ9Y263 795 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 MED16Q9Y2X0 877 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 KNL1Q8NG31 2342 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 FAM186AA6NE01 2351 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 EP300Q09472 2414 aaPredicted RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 A0A096LPK6 155 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 FAM221BA6H8Z2 402 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 KRT87PA6NCN2 255 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 NCF1BA6NI72 391 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 NCF1CA8MVU1 366 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 SUPT3HB4E1H0 165 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CDC7O00311 574 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 BTN3A3O00478 584 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 NTN3O00634 580 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 CDH16O75309 829 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 SUPT3HO75486 399 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 C2P06681 752 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 ANXA5P08758 320 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CHRM5P08912 532 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 ENO2P09104 434 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 LTA4HP09960 611 aaKnown RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 JMJD7P0C870 316 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 NCF1P14598 390 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 HOXB3P14651 431 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 TFEBP19484 476 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 SPINK2P20155 84 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 PKLRP30613 574 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CSF2RBP32927 897 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 HSD17B2P37059 387 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 GLRBP48167 497 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 SEPHS1P49903 392 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 KPNA2P52292 529 aaKnown RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 PNLIPRP1P54315 467 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 GFERP55789 205 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 TIAL1Q01085 375 aaKnown RBP eCLIP6.12□□□□□ -1.43
LTBR-212ENST00000543542 SF1Q15637 639 aaKnown RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 ISXQ2M1V0 245 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CCSMST1Q4G0I0 132 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 C3orf38Q5JPI3 329 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 TMTC4Q5T4D3 741 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 ANKS6Q68DC2 871 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 ADGRD1Q6QNK2 874 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 WDR74Q6RFH5 385 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 TMEM207Q6UWW9 146 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CYHR1Q6ZMK1 362 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CCDC91Q7Z6B0 441 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 RAB44Q7Z6P3 723 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 B3GNT8Q7Z7M8 397 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 ADAMTSL2Q86TH1 951 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 FAM129CQ86XR2 697 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CNPY4Q8N129 248 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 FBXO39Q8N4B4 442 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 PPFIBP2Q8ND30 876 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 RCBTB1Q8NDN9 531 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 MYRIPQ8NFW9 859 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 OR4D9Q8NGE8 314 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 OR2L8Q8NGY9 312 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 KCTD4Q8WVF5 259 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 ANKRD49Q8WVL7 239 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 ATL1Q8WXF7 558 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 ASB11Q8WXH4 323 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 N4BP2L2Q92802 583 aaPredicted RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 SLC22A18Q96BI1 424 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 PDLIM5Q96HC4 596 aaKnown RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 CABS1Q96KC9 395 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CCDC138Q96M89 665 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 PKP4Q99569 1192 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 NRTNQ99748 197 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CMKLR1Q99788 373 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 MCMBPQ9BTE3 642 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 SCNM1Q9BWG6 230 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 DERL2Q9GZP9 239 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 SEMA6CQ9H3T2 930 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 PCMTD2Q9NV79 361 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 INTS7Q9NVH2 962 aaKnown RBP6.12□□□□□ -1.43
LTBR-212ENST00000543542 WDR70Q9NW82 654 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 SOHLH2Q9NX45 425 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 ACTR10Q9NZ32 417 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 OR6C2Q9NZP2 312 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CD274Q9NZQ7 290 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 TMEM9Q9P0T7 183 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 FETUBQ9UGM5 382 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 ADAMTS6Q9UKP5 1117 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 PDE10AQ9Y233 779 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms