RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 DGKEP52429 567 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ADARP55265 1226 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ABCE1P61221 599 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 KCNJ2P63252 427 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 MXRA7P84157 204 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 MTAPQ13126 283 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SGCGQ13326 291 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TGFBIQ15582 683 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ZXDCQ2QGD7 858 aaPredicted RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ZNF542PQ5EBM4 170 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ARL13AQ5H913 290 aaPredicted RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SPDYAQ5MJ70 313 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 EOGTQ5NDL2 527 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 LIPMQ5VYY2 423 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ARMC3Q5W041 872 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 DUS1LQ6P1R4 473 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 CHST15Q7LFX5 561 aaPredicted RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 CFAP206Q8IYR0 622 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 C2orf73Q8N5S3 287 aaPredicted RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PPFIBP2Q8ND30 876 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 MAPK15Q8TD08 544 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PYCR2Q96C36 320 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TOE1Q96GM8 510 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 HIC2Q96JB3 615 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 HBEGFQ99075 208 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TTC1Q99614 292 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 CCDC28BQ9BUN5 200 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 GPR174Q9BXC1 333 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 DERL2Q9GZP9 239 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 RNPEPL1Q9HAU8 725 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SMOXQ9NWM0 555 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 CD274Q9NZQ7 290 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ZNHIT2Q9UHR6 403 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ZDHHC2Q9UIJ5 367 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 G3BP2Q9UN86 482 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TRIM33Q9UPN9 1127 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PCDHB1Q9Y5F3 818 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ST14Q9Y5Y6 855 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TECTAO75443 2155 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SNRNP200O75643 2136 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 LRP4O75096 1905 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 THADAQ6YHU6 1953 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PSMD11O00231 422 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 BIRC5O15392 142 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 IPO13O94829 963 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SERPINE1P05121 402 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 COL6A2P12110 1019 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ACP5P13686 325 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 CD1EP15812 388 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 GNAZP19086 355 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 NFKBIAP25963 317 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SERPINB3P29508 390 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PPARGP37231 505 aaPredicted RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ARL1P40616 181 aaPredicted RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 HSPA7P48741 367 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 FOXA1P55317 472 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 RPS21P63220 83 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 CUL3Q13618 768 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ZRSR2Q15696 482 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PPP1R3AQ16821 1122 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SYTL3Q4VX76 610 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TCHHL1Q5QJ38 904 aaPredicted RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 IRGCQ6NXR0 463 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SCIMPQ6UWF3 145 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 CYHR1Q6ZMK1 362 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 FRA10AC1Q70Z53 315 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TRMT11Q7Z4G4 463 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 HORMAD1Q86X24 394 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 GPSM1Q86YR5 675 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SFTPA2Q8IWL1 248 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 MYO1HQ8N1T3 1032 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ENDOVQ8N8Q3 282 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SNX31Q8N9S9 440 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PHC3Q8NDX5 983 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TSTD1Q8NFU3 115 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 CCL4L1Q8NHW4 92 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PPP4R1Q8TF05 950 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 INPP5DQ92835 1189 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 KIAA1191Q96A73 305 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 RAB7BQ96AH8 199 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 ULK4Q96C45 1275 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PDXPQ96GD0 296 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SLC45A3Q96JT2 553 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SPACA7Q96KW9 195 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 MARK4Q96L34 752 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 VPS35Q96QK1 796 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 EGFL8Q99944 293 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TMEM120AQ9BXJ8 343 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 OSGEPL1Q9H4B0 414 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 GSTO2Q9H4Y5 243 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 WDR26Q9H7D7 661 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 KCNK13Q9HB14 408 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 GIMAP2Q9UG22 337 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PLAGL1Q9UM63 463 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 KCNK6Q9Y257 313 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SPAG17Q6Q759 2223 aa7.54□□□□□ -1.2
AC005840.3-201ENST00000541888 NPC1O15118 1278 aa7.54□□□□□ -1.2
AC005840.3-201ENST00000541888 AP1G1O43747 822 aa7.54□□□□□ -1.2
AC005840.3-201ENST00000541888 HNRNPCL1O60812 293 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms