RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 MESDQ14696 234 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 RPE65Q16518 533 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 CA9Q16790 459 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 DEFB110Q30KQ9 67 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 HENMT1Q5T8I9 393 aaKnown RBP9.41□□□□□ -0.9
CHFR-220ENST00000541817 CES4AQ5XG92 561 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 ACAD10Q6JQN1 1059 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 KLHL35Q6PF15 583 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 NOP9Q86U38 636 aaKnown RBP9.41□□□□□ -0.9
CHFR-220ENST00000541817 LRRTM4Q86VH4 590 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 OOSP2Q86WS3 158 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 SPPL2CQ8IUH8 684 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 RBM12BQ8IXT5 1001 aaKnown RBP9.41□□□□□ -0.9
CHFR-220ENST00000541817 SPOCK2Q92563 424 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 ZNF653Q96CK0 615 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 PWWP2AQ96N64 755 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.41□□□□□ -0.9
CHFR-220ENST00000541817 TRIM39Q9HCM9 518 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 C1GALT1Q9NS00 363 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 TAS2R14Q9NYV8 317 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 PTGFRNQ9P2B2 879 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 CHKBQ9Y259 395 aa9.41□□□□□ -0.9
CHFR-220ENST00000541817 INTS1Q8N201 2190 aaKnown RBP9.41□□□□□ -0.9
CHFR-220ENST00000541817 TRAV17A0A0B4J275 112 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 DYTNA2CJ06 578 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 RNF212BA8MTL3 300 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 INAFM1C9JVW0 142 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 CHUKO15111 745 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 FGF10O15520 208 aaPredicted RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 TTI1O43156 1089 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 SPOPO43791 374 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 PRAMEF2O60811 474 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 SHOX2O60902 331 aaPredicted RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 PHF2O75151 1096 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 ZNF30P17039 623 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 IGFBP2P18065 325 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 DNASE1P24855 282 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 CTNNA2P26232 953 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 RFC1P35251 1148 aaPredicted RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 HALP42357 657 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 PTPN9P43378 593 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 SPINT3P49223 89 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 ST13P50502 369 aaKnown RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 GNGT1P63211 74 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 DR1Q01658 176 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 RFTN1Q14699 578 aaPredicted RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 CEP85LQ5SZL2 805 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 PPP1R2P3Q6NXS1 205 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 MRPL14Q6P1L8 145 aaKnown RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 KIRREL2Q6UWL6 708 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 ZNF677Q86XU0 584 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 DMRTC2Q8IXT2 367 aaPredicted RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 SIRT6Q8N6T7 355 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 AGAP11Q8TF27 550 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 UBLCP1Q8WVY7 318 aaPredicted RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 MAIP1Q8WWC4 291 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 ARL8AQ96BM9 186 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 ATP6V1G3Q96LB4 118 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 LMF1Q96S06 567 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 PCDHB18PQ96TA0 734 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 DPH2Q9BQC3 489 aaPredicted RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 C11orf70Q9BRQ4 267 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 NUP85Q9BW27 656 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 SPATA16Q9BXB7 569 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 POLDIP3Q9BY77 421 aaKnown RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 FAM107BQ9H098 131 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 TSPYL1Q9H0U9 437 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 DPH5Q9H2P9 285 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 IMP3Q9NV31 184 aaKnown RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 LRFN1Q9P244 771 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 AMACRQ9UHK6 382 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 NOCTQ9UK39 431 aaKnown RBP9.4□□□□□ -0.9
CHFR-220ENST00000541817 HS3ST3B1Q9Y662 390 aa9.4□□□□□ -0.9
CHFR-220ENST00000541817 C1orf232A0A0U1RR37 186 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 GSAPA4D1B5 854 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 DAPK3O43293 454 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 FZD6O60353 706 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 CRYABP02511 175 aaKnown RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 SLC4A1P02730 911 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 MYZAPP0CAP1 466 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 MYBL1P10243 752 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 ERCC2P18074 760 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 GPD1P21695 349 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 COMTP21964 271 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 PBLDP30039 288 aaPredicted RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 CTNNA1P35221 906 aaKnown RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 HSD17B3P37058 310 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 RWDD2BP57060 319 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 NOMO3P69849 1222 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 DCDP81605 110 aaKnown RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 TMPRSS15P98073 1019 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 HSF1Q00613 529 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 FMO1Q01740 532 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 ITKQ08881 620 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 GTF3C1Q12789 2109 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 SNTB1Q13884 538 aaKnown RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 CLEC16AQ2KHT3 1053 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 TTMPQ5BVD1 217 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 AGBL2Q5U5Z8 902 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms