RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 TRPS1Q9UHF7 1281 aa9.33□□□□□ -0.92
CNOT4-212ENST00000541284 MBD1Q9UIS9 605 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-212ENST00000541284 PDE10AQ9Y233 779 aa9.33□□□□□ -0.92
CNOT4-212ENST00000541284 ERGIC3Q9Y282 383 aa9.33□□□□□ -0.92
CNOT4-212ENST00000541284 B3GNT3Q9Y2A9 372 aa9.33□□□□□ -0.92
CNOT4-212ENST00000541284 AGAP14A8MT82 685 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 LOC730098B7Z3J9 87 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 NT5C1B-RDH14C9J2C7 533 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 M0QX08 132 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF821O75541 412 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 CREG1O75629 220 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 PGLSO95336 258 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 SEC24AO95486 1093 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 GUCA1CO95843 209 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 BCKDHAP12694 445 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF12P17014 697 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ITGB6P18564 788 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 OPRL1P41146 370 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 SLC11A2P49281 568 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 IFITM3Q01628 133 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ZC3H12BQ5HYM0 836 aaKnown RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ATG9BQ674R7 924 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 FAM151BQ6UXP7 276 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 DNAJC14Q6Y2X3 702 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 TAS2R42Q7RTR8 314 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 PIWIL3Q7Z3Z3 882 aaKnown RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 CLEC4FQ8N1N0 589 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 STK40Q8N2I9 435 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 PCSK9Q8NBP7 692 aaKnown RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 TBC1D20Q96BZ9 403 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF689Q96CS4 500 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ITCHQ96J02 903 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 SIGLEC11Q96RL6 698 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 UGT2B28Q9BY64 529 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 PFDN4Q9NQP4 134 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 LIMD1Q9UGP4 676 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 GNPTGQ9UJJ9 305 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 OGDHLQ9ULD0 1010 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 FCF1Q9Y324 198 aaKnown RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 PCDHB9Q9Y5E1 797 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 C2orf78A6NCI8 922 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ARVCFO00192 962 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 MITFO75030 526 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 AOC2O75106 756 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 SERPINB7O75635 380 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 WDR47O94967 919 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 SCELO95171 688 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ITGAMP11215 1152 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 TACR1P25103 407 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 RYKP34925 604 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 RELAQ04206 551 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 NOGQ13253 232 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 IQCCQ4KMZ1 466 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ADGRF1Q5T601 910 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 TTC23Q5W5X9 447 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 FKBP9P1Q75LS8 142 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 CEP68Q76N32 757 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 TMEM150AQ86TG1 271 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ANKRD13BQ86YJ7 626 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ZCCHC7Q8N3Z6 543 aaKnown RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 SPC25Q9HBM1 224 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 TBC1D23Q9NUY8 699 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 C2orf16Q68DN1 1984 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 LOC100130705A0A1B0GUX0 176 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 RAD51BO15315 384 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 CBFA2T3O75081 653 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 PRAMEF1O95521 474 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 IL6P05231 212 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 MASP1P48740 699 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 CDK5R2Q13319 367 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF177Q13360 481 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 NFATC2Q13469 925 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 MAPKAPK3Q16644 382 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 CPZQ66K79 652 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 CCDC71Q8IV32 467 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ADGRG2Q8IZP9 1017 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 GLB1L3Q8NCI6 653 aaPredicted RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 OR10Q1Q8NGQ4 319 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 OR5K1Q8NHB7 308 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 CLHC1Q8NHS4 586 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 C2orf15Q8WU43 125 aaKnown RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 RBM4BQ9BQ04 359 aaKnown RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 RHNO1Q9BSD3 238 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 TBCDQ9BTW9 1192 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 RBM4Q9BWF3 364 aaKnown RBP9.32□□□□□ -0.92
CNOT4-212ENST00000541284 RDH14Q9HBH5 336 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ZFP14Q9HCL3 533 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 LATS2Q9NRM7 1088 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 VPS51Q9UID3 782 aa9.32□□□□□ -0.92
CNOT4-212ENST00000541284 ADAM23O75077 832 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 UGT2B11O75310 529 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 GABARAPO95166 117 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 HNRNPCP07910 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
CNOT4-212ENST00000541284 ACRV1P26436 265 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 HOXA9P31269 272 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 CLK3P49761 638 aaKnown RBP9.31□□□□□ -0.92
CNOT4-212ENST00000541284 RAB15P59190 212 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 B4GALNT1Q00973 533 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 EMX1Q04741 257 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms