RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 SLC17A6Q9P2U8 582 aa6.33□□□□□ -1.4
TTR-203ENST00000541025 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.33□□□□□ -1.4
TTR-203ENST00000541025 LCMT1Q9UIC8 334 aa6.33□□□□□ -1.4
TTR-203ENST00000541025 FADS3Q9Y5Q0 445 aa6.33□□□□□ -1.4
TTR-203ENST00000541025 PCNX2A6NKB5 2137 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 COL27A1Q8IZC6 1860 aaPredicted RBP6.32□□□□□ -1.4
TTR-203ENST00000541025 AKAP13Q12802 2813 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 C16orf96A6NNT2 1141 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 BTNL10A8MVZ5 291 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 AREL1O15033 823 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 RAD51BO15315 384 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 SLC31A1O15431 190 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 SGTAO43765 313 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 SPOPO43791 374 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 PEX14O75381 377 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 PRKCGP05129 697 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 KRT10P13645 584 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 SERPINB6P35237 376 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 DPP6P42658 865 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 CDKN2BP42772 138 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 SLC1A1P43005 524 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 CLDN2P57739 230 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 RFTN1Q14699 578 aaPredicted RBP6.32□□□□□ -1.4
TTR-203ENST00000541025 PTPRRQ15256 657 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 TAZQ16635 292 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 KIF19Q2TAC6 998 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 HLA-BQ31612 363 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 LRRC38Q5VT99 294 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 SLC9A4Q6AI14 798 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 C11orf63Q6NUN7 778 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 USP45Q70EL2 814 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 RABEPKQ7Z6M1 372 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 SRLQ86TD4 932 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 TEX26Q8N6G2 289 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 LRRC57Q8N9N7 239 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 HDAC11Q96DB2 347 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 PPP1R16AQ96I34 528 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 LRIG1Q96JA1 1093 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 SERAC1Q96JX3 654 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 CLPTM1LQ96KA5 538 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 ZNF599Q96NL3 588 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 PSKH2Q96QS6 385 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 LGMNQ99538 433 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 MGME1Q9BQP7 344 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 HERPUD2Q9BSE4 406 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 RTKNQ9BST9 563 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 ANP32EQ9BTT0 268 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 C11orf54Q9H0W9 315 aaPredicted RBP6.32□□□□□ -1.4
TTR-203ENST00000541025 DYRK4Q9NR20 520 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 HEY1Q9Y5J3 304 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 CACNA1AO00555 2505 aa6.32□□□□□ -1.4
TTR-203ENST00000541025 KNL1Q8NG31 2342 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 MED19A0JLT2 244 aaPredicted RBP6.31□□□□□ -1.4
TTR-203ENST00000541025 TSPAN11A1L157 253 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 CDHR4A6H8M9 788 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 IGLON5A6NGN9 336 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 ZNF487B1APH4 448 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 KCNK1O00180 336 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 TRAFD1O14545 582 aaPredicted RBP6.31□□□□□ -1.4
TTR-203ENST00000541025 APOL1O14791 398 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 VILLO15195 856 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 PSTPIP1O43586 416 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 AP1G1O43747 822 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 PEX1O43933 1283 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 PROP1O75360 226 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 PAK4O96013 591 aaPredicted RBP6.31□□□□□ -1.4
TTR-203ENST00000541025 HLA-DQB2P05538 268 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 MTHFD1P11586 935 aaKnown RBP6.31□□□□□ -1.4
TTR-203ENST00000541025 CD59P13987 128 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 PECAM1P16284 738 aaPredicted RBP6.31□□□□□ -1.4
TTR-203ENST00000541025 HNRNPA2B1P22626 353 aaKnown RBP6.31□□□□□ -1.4
TTR-203ENST00000541025 FOLR3P41439 243 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 MMP13P45452 471 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 CSNK1DP48730 415 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 DYNLT1P63172 113 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 CCZ1BP86790 482 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 CCZ1P86791 482 aaPredicted RBP6.31□□□□□ -1.4
TTR-203ENST00000541025 IL9RQ01113 521 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 RAD51Q06609 339 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 NSUN2Q08J23 767 aaKnown RBP eCLIP6.31□□□□□ -1.4
TTR-203ENST00000541025 TRAF2Q12933 501 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 RALGDSQ12967 914 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 ZBTB17Q13105 803 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 ZNF235Q14590 738 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 SHBQ15464 509 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 UGP2Q16851 508 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 MARC1Q5VT66 337 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 KAZNQ674X7 775 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 NAPEPLDQ6IQ20 393 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 AADACL2Q6P093 401 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 NEK5Q6P3R8 708 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 GCNT7Q6ZNI0 430 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 DAAM2Q86T65 1068 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 KIAA1328Q86T90 577 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 TTC7BQ86TV6 843 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 PRPF39Q86UA1 669 aaKnown RBP6.31□□□□□ -1.4
TTR-203ENST00000541025 HORMAD1Q86X24 394 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 VSIG1Q86XK7 387 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 RFX6Q8HWS3 928 aa6.31□□□□□ -1.4
TTR-203ENST00000541025 MAP7D3Q8IWC1 876 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms