RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 MSGN1A6NI15 193 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 KLF11O14901 512 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 EXTL3O43909 919 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 TOMM70O94826 608 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 PGM3O95394 542 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 TBX6O95947 436 aaPredicted RBP5.29□□□□□ -1.56
YBX3-210ENST00000540975 DNASE1P24855 282 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 CBWD6Q4V339 395 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 KLHL26Q53HC5 615 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 CBWD3Q5JTY5 395 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 MYPOPQ86VE0 399 aaPredicted RBP5.29□□□□□ -1.56
YBX3-210ENST00000540975 MARVELD2Q8N4S9 558 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 OR10S1Q8NGN2 331 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 PHLDA1Q8WV24 401 aaPredicted RBP5.29□□□□□ -1.56
YBX3-210ENST00000540975 SUSD6Q92537 303 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 NUP85Q9BW27 656 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 MRPL1Q9BYD6 325 aaKnown RBP5.29□□□□□ -1.56
YBX3-210ENST00000540975 OPA3Q9H6K4 179 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 EQTNQ9NQ60 294 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 KLHL8Q9P2G9 620 aaPredicted RBP5.29□□□□□ -1.56
YBX3-210ENST00000540975 CRNNQ9UBG3 495 aaPredicted RBP5.29□□□□□ -1.56
YBX3-210ENST00000540975 CACNG4Q9UBN1 327 aa5.29□□□□□ -1.56
YBX3-210ENST00000540975 EXOGQ9Y2C4 368 aaKnown RBP5.29□□□□□ -1.56
YBX3-210ENST00000540975 PCDH11YQ9BZA8 1340 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 KHDRBS3O75525 346 aaKnown RBP5.28□□□□□ -1.56
YBX3-210ENST00000540975 GPIP06744 558 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 MATR3P43243 847 aaKnown RBP eCLIP5.28□□□□□ -1.56
YBX3-210ENST00000540975 ADGRA1Q86SQ6 560 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 DNAAF5Q86Y56 855 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 ZNF595Q8IYB9 648 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 LSMEM2Q8N112 164 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 SYT2Q8N9I0 419 aaPredicted RBP5.28□□□□□ -1.56
YBX3-210ENST00000540975 CCDC107Q8WV48 283 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 PTERQ96BW5 349 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 DHX58Q96C10 678 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 MAGED4Q96JG8 741 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 ATP13A3Q9H7F0 1226 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 FGF21Q9NSA1 209 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 RNF186Q9NXI6 227 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 DAPK2Q9UIK4 370 aa5.28□□□□□ -1.56
YBX3-210ENST00000540975 GLOD5A6NK44 160 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 KRTAP16-1A8MUX0 517 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 IPO8O15397 1037 aaKnown RBP5.27□□□□□ -1.57
YBX3-210ENST00000540975 DFFBO76075 338 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 DANCRP0C864 163 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 HSPA8P11142 646 aaKnown RBP5.27□□□□□ -1.57
YBX3-210ENST00000540975 CASP2P42575 452 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 PRKG2Q13237 762 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 SNAPC1Q16533 368 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 SPDYCQ5MJ68 293 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 C20orf194Q5TEA3 1177 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.27□□□□□ -1.57
YBX3-210ENST00000540975 Q6ZSR9 355 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 EID3Q8N140 333 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 DCLK2Q8N568 766 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 DYRK2Q92630 601 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 GCNAQ96QF7 691 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 P2RY12Q9H244 342 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 CPVLQ9H3G5 476 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 GOLPH3LQ9H4A5 285 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 SNX8Q9Y5X2 465 aa5.27□□□□□ -1.57
YBX3-210ENST00000540975 MEIS2O14770 477 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 SMIM18P0DKX4 95 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 IGHV4-31P0DP07 118 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 KRT5P13647 590 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 PFKFB1P16118 471 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 MAZP56270 477 aaKnown RBP5.26□□□□□ -1.57
YBX3-210ENST00000540975 CTU2Q2VPK5 515 aaKnown RBP5.26□□□□□ -1.57
YBX3-210ENST00000540975 SYT14P1Q58G82 188 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 XKR3Q5GH77 459 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 ELFN2Q5R3F8 820 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 TMPRSS11BQ86T26 416 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 NUDT13Q86X67 352 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 ZNF614Q8N883 585 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 CFAP61Q8NHU2 1237 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 SSMEM1Q8WWF3 244 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 SLAMF9Q96A28 289 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 SPDL1Q96EA4 605 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 NAP1L5Q96NT1 182 aaPredicted RBP5.26□□□□□ -1.57
YBX3-210ENST00000540975 RAD9AQ99638 391 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 PITPNM3Q9BZ71 974 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 Q9N2K0 584 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 SPHK1Q9NYA1 384 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 ASIC3Q9UHC3 531 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 RPS6KA6Q9UK32 745 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 MYO15BQ96JP2 1530 aa5.26□□□□□ -1.57
YBX3-210ENST00000540975 CACNA1FO60840 1977 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 NDUFAF8A1L188 74 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 AHCYL1O43865 530 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 DPEP1P16444 411 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 TYMPP19971 482 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 SLC6A12P48065 614 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 TAF6P49848 677 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 IRX6P78412 446 aaPredicted RBP5.25□□□□□ -1.57
YBX3-210ENST00000540975 HNRNPDQ14103 355 aaKnown RBP5.25□□□□□ -1.57
YBX3-210ENST00000540975 CFAP161Q6P656 301 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 FAM198BQ6UWH4 519 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 BRINP3Q76B58 766 aa5.25□□□□□ -1.57
YBX3-210ENST00000540975 CDK20Q8IZL9 346 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms