RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 A0A1B0GX78 115 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 C5orf60A6NFR6 353 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 CFAP99D6REC4 459 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 CHRM5P08912 532 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 H2AFZP0C0S5 128 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 ITGAXP20702 1163 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 SSTR2P30874 369 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 GCGRP47871 477 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 NR2C2P49116 596 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 DYNLT1P63172 113 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 ARG2P78540 354 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 TMPRSS15P98073 1019 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 XIAPP98170 497 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 MPP3Q13368 585 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 TAF1AQ15573 450 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 INAQ16352 499 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 XKRXQ6PP77 449 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 TTLL10Q6ZVT0 673 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 H2AFVQ71UI9 128 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 PID1Q7Z2X4 250 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 OR11G2Q8NGC1 345 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 FLVCR1-AS1Q8TAF5 88 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 TFB1MQ8WVM0 346 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 ULK4Q96C45 1275 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 SPSB2Q99619 263 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 COPS8Q99627 209 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 SEMA3GQ9NS98 782 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 SPHK1Q9NYA1 384 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 EURLQ9NYK6 297 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 OR6C2Q9NZP2 312 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 FKBPLQ9UIM3 349 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 CRLS1Q9UJA2 301 aa11.17□□□□□ -0.62
CLSTN3-209ENST00000539982 TRAV17A0A0B4J275 112 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 DYTNA2CJ06 578 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 UNC5CO95185 931 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 AGTP01019 485 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 CA7P43166 264 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 MESDQ14696 234 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 NR1I3Q14994 352 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 RBBP7Q16576 425 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 MCATQ8IVS2 390 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 ZNF567Q8N184 647 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 OR5AR1Q8NGP9 310 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 HAS2Q92819 552 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 VAT1Q99536 393 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 FSD1LQ9BXM9 530 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 NAT10Q9H0A0 1025 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 FAM96AQ9H5X1 160 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 SOX17Q9H6I2 414 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 VPS37BQ9H9H4 285 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 KLHL8Q9P2G9 620 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 SAE1Q9UBE0 346 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 POLG2Q9UHN1 485 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 NXT1Q9UKK6 140 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 NENFQ9UMX5 172 aa11.16□□□□□ -0.62
CLSTN3-209ENST00000539982 KCNN4O15554 427 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 PRICKLE3O43900 615 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 HPP00738 406 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 GSTM1P09488 218 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 TPBGLP0DKB5 382 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 AGAP20933 346 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 PBX1P40424 430 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 TNFSF10P50591 281 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 GSTM4Q03013 218 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 KIR2DS3Q14952 304 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 ODF2Q5BJF6 829 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 SHISA6Q6ZSJ9 500 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 COX15Q7KZN9 410 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 SNX20Q7Z614 316 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 TBC1D21Q8IYX1 336 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 DNAJB8Q8NHS0 232 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 CTNNBL1Q8WYA6 563 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 POM121Q96HA1 1249 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 ZDHHC3Q9NYG2 299 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 PLA2G3Q9NZ20 509 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 IL1RAPL1Q9NZN1 696 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 ABI3Q9P2A4 366 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 SEC14L3Q9UDX4 400 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 ASF1AQ9Y294 204 aa11.15□□□□□ -0.62
CLSTN3-209ENST00000539982 IGLV3-16A0A075B6K0 115 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 SYCE3A1L190 88 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 VSTM2BA6NLU5 285 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 SMTNL1A8MU46 457 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 ISM1B1AKI9 464 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 DSCR3O14972 297 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 USP1O94782 785 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 CRTAMO95727 393 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 CRYABP02511 175 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 KRT1P04264 644 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 ITGALP20701 1170 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 MST1P26927 711 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 ACADLP28330 430 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 CARSP49589 748 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 KRTAP10-9P60411 292 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 ZBED6P86452 979 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 FANCCQ00597 558 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 RBPJQ06330 500 aa11.14□□□□□ -0.63
CLSTN3-209ENST00000539982 GPR33Q49SQ1 333 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms