RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CHURC1-FNTBB4DL54 471 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 OR7A17O14581 309 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 GPR37L1O60883 481 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 PEX11AO75192 247 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 EPB42P16452 691 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 VHLP40337 213 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 SLC6A12P48065 614 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 DGKEP52429 567 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 FOXA1P55317 472 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 ABRQ12979 859 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 LRRC32Q14392 662 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 MUM1Q2TAK8 710 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 CHSY3Q70JA7 882 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 AMZ2Q86W34 360 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 ATP6V1E2Q96A05 226 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 CMTM5Q96DZ9 223 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 CCDC138Q96M89 665 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 GBP5Q96PP8 586 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 NTMT1Q9BV86 223 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 RMI1Q9H9A7 625 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 SGK2Q9HBY8 427 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 FAM8A1Q9UBU6 413 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 MRPS17Q9Y2R5 130 aaKnown RBP16.46■□□□□ 0.23
COPS3-212ENST00000539941 A0A1B0GTL3 188 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 PRR23AA6NEV1 266 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 LRRC72A6NJI9 287 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 ARHGEF33A8MVX0 844 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 KMOO15229 486 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 NVLO15381 856 aaKnown RBP16.46■□□□□ 0.23
COPS3-212ENST00000539941 DCXO43602 365 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 HOXC4P09017 264 aaPredicted RBP16.46■□□□□ 0.23
COPS3-212ENST00000539941 CHRNB1P11230 501 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 GABRG2P18507 467 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 CD72P21854 359 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 PRDX3P30048 256 aaKnown RBP16.46■□□□□ 0.23
COPS3-212ENST00000539941 TPMTP51580 245 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 ERVPABLB-1P60509 514 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 TRAF3Q13114 568 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 CRTC3Q6UUV7 619 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 MBOAT1Q6ZNC8 495 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 LARP4Q71RC2 724 aaKnown RBP eCLIP16.46■□□□□ 0.23
COPS3-212ENST00000539941 LILRA3Q8N6C8 439 aaPredicted RBP16.46■□□□□ 0.23
COPS3-212ENST00000539941 OR52B6Q8NGF0 335 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 OR2T34Q8NGX1 318 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 FOXJ1Q92949 421 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 NR1H4Q96RI1 486 aaPredicted RBP16.46■□□□□ 0.23
COPS3-212ENST00000539941 KCNA7Q96RP8 456 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 LGR4Q9BXB1 951 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 DLGAP2Q9P1A6 1054 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 ST14Q9Y5Y6 855 aa16.46■□□□□ 0.23
COPS3-212ENST00000539941 PIP5K1BO14986 540 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 OR4F21O95013 312 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 IGLV3-19P01714 112 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 EBLN1P0CF75 366 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 PDHA2P29803 388 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 IGFALSP35858 605 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 POLE2P56282 527 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 KLF10Q13118 480 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 LETMD1Q6P1Q0 360 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 DOK6Q6PKX4 331 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 XKR5Q6UX68 686 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 RNF165Q6ZSG1 346 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 SYT13Q7L8C5 426 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 MILR1Q7Z6M3 343 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 KLHDC8AQ8IYD2 350 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 ZNF687Q8N1G0 1237 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 KLK6Q92876 244 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 MAGEB10Q96LZ2 347 aaPredicted RBP16.45■□□□□ 0.22
COPS3-212ENST00000539941 BTBD1Q9H0C5 482 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 ITM2CQ9NQX7 267 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 TRPS1Q9UHF7 1281 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 RAPGEFL1Q9UHV5 662 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 PCDHGA4Q9Y5G9 962 aa16.45■□□□□ 0.22
COPS3-212ENST00000539941 ZFC3H1O60293 1989 aaKnown RBP16.45■□□□□ 0.22
COPS3-212ENST00000539941 KCNJ13O60928 360 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 GDF5P43026 501 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 ATP4BP51164 291 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 PPP2CBP62714 309 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 PPP2CAP67775 309 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.44■□□□□ 0.22
COPS3-212ENST00000539941 TMEM31Q5JXX7 168 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 UNC5DQ6UXZ4 953 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 FAM124AQ86V42 546 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 DDIASQ8IXT1 998 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 OR4F6Q8NGB9 312 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 BTBD10Q9BSF8 475 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 TUBB1Q9H4B7 451 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 USP36Q9P275 1121 aaKnown RBP16.44■□□□□ 0.22
COPS3-212ENST00000539941 SLC17A4Q9Y2C5 497 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 OR1A2Q9Y585 309 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 COMMD3-BMI1R4GMX3 469 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 NUMA1Q14980 2115 aa16.44■□□□□ 0.22
COPS3-212ENST00000539941 FAM86C2PA6NEL3 165 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 A8MUI8 341 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 CACNB4O00305 520 aaPredicted RBP16.43■□□□□ 0.22
COPS3-212ENST00000539941 UBDO15205 165 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 WDR47O94967 919 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 C1orf105O95561 183 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 HGFP14210 728 aa16.43■□□□□ 0.22
COPS3-212ENST00000539941 ARL1P40616 181 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms