RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ZNF23P17027 643 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 PRDX3P30048 256 aaKnown RBP16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 CBSP35520 551 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 GPR1P46091 355 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 RHDQ02161 417 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 CARM1Q86X55 608 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 RAVER1Q8IY67 606 aaKnown RBP16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 IL17RCQ8NAC3 791 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 ELMO1Q92556 727 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 PPP1R14BQ96C90 147 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 KCNA7Q96RP8 456 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 OSBPL11Q9BXB4 747 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 MKRN2Q9H000 416 aaKnown RBP16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 SLC6A17Q9H1V8 727 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 OARD1Q9Y530 152 aa16.69■□□□□ 0.26
PCDHB17P-201ENST00000539533 A0A1W2PP55 124 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 E2F3O00716 465 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 RAD51BO15315 384 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 AP2A2O94973 939 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 NTSR1P30989 418 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 LCP2Q13094 533 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 STX5Q13190 355 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 GBX1Q14549 363 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 CRY1Q16526 586 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 UGT3A2Q3SY77 523 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 CHSY3Q70JA7 882 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 HDDC3Q8N4P3 179 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 TRIML2Q8N7C3 387 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 SKA2Q8WVK7 121 aaPredicted RBP16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 ASB2Q96Q27 587 aa16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 COLQQ9Y215 455 aaPredicted RBP16.68■□□□□ 0.26
PCDHB17P-201ENST00000539533 SOX1O00570 391 aaPredicted RBP16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 NPC1O15118 1278 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 TSPAN6O43657 245 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 ADAM23O75077 832 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 H6PDO95479 791 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 LRP8Q14114 963 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 MBOAT1Q6ZNC8 495 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 PHYKPLQ8IUZ5 450 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 CLYBLQ8N0X4 340 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 HMGCLL1Q8TB92 370 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 SLCO4A1Q96BD0 722 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 HSPBAP1Q96EW2 488 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 FAR2Q96K12 515 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 HGH1Q9BTY7 390 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 RSL24D1Q9UHA3 163 aaKnown RBP16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 TRIOO75962 3097 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 TMEM265A0A087WTH1 108 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 IGLON5A6NGN9 336 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 TAPBPO15533 448 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 PCDH8O95206 1070 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 ASGR2P07307 311 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 FGF4P08620 206 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 C5AR1P21730 350 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 RPS14P62263 151 aaKnown RBP16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 DPTQ07507 201 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 CBX3Q13185 183 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 MAPRE2Q15555 327 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 REP15Q6BDI9 236 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 TMEM220Q6QAJ8 160 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 ZNF765Q7L2R6 523 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 LILRA3Q8N6C8 439 aaPredicted RBP16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 PLA2G15Q8NCC3 412 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 PDPRQ8NCN5 879 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 EGFL8Q99944 293 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 ZNF225Q9UK10 706 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 DNAJC15Q9Y5T4 150 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 SNX13Q9Y5W8 968 aa16.67■□□□□ 0.26
PCDHB17P-201ENST00000539533 FBP2O00757 339 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 AZIN1O14977 448 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 MBTPS2O43462 519 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 NUAK1O60285 661 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 ADH1BP00325 375 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 FTH1P02794 183 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 ALDH3B2P48448 385 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 TRAP1Q12931 704 aaKnown RBP16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 SQLEQ14534 574 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 MTX3Q5HYI7 312 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 PLEKHS1Q5SXH7 462 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 AFAP1L2Q8N4X5 818 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 DCBLD1Q8N8Z6 715 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 GABRG3Q99928 467 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 TMEM79Q9BSE2 394 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 OR2AG1Q9H205 316 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 MEAF6Q9HAF1 191 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 PTBP2Q9UKA9 531 aaKnown RBP16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 MYO10Q9HD67 2058 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 TCRBV3S1A0A5B6 114 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 PRORSD1PA6NEY8 169 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 PSMD12O00232 456 aaPredicted RBP16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 GPC4O75487 556 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 KLF8O95600 359 aaPredicted RBP16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 S100BP04271 92 aaPredicted RBP16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 NELFEP18615 380 aaKnown RBP16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 COL9A1P20849 921 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 SLC7A1P30825 629 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 GDF5P43026 501 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 HSPA7P48741 367 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 FASTKQ14296 549 aaKnown RBP16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 AGKQ53H12 422 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms