RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 SIT1Q9Y3P8 196 aa8.65□□□□□ -1.02
DDB1-213ENST00000539332 DTNAQ9Y4J8 743 aa8.65□□□□□ -1.02
DDB1-213ENST00000539332 CEP192Q8TEP8 1941 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 PLXND1Q9Y4D7 1925 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 PCM1Q15154 2024 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 IGLON5A6NGN9 336 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 LRRC14BA6NHZ5 514 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 TRPC5OSA6NMA1 111 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 HNRNPRO43390 633 aaKnown RBP8.64□□□□□ -1.03
DDB1-213ENST00000539332 LZTS3O60299 673 aaPredicted RBP8.64□□□□□ -1.03
DDB1-213ENST00000539332 LILRB5O75023 590 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 SUPT7LO94864 414 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 SLCO2B1O94956 709 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 JUNP05412 331 aaKnown RBP8.64□□□□□ -1.03
DDB1-213ENST00000539332 SMIM18P0DKX4 95 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 GFAPP14136 432 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 ITGB6P18564 788 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 TEAD1P28347 426 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 EEF1DP29692 281 aaKnown RBP8.64□□□□□ -1.03
DDB1-213ENST00000539332 CPA2P48052 419 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 NR1H2P55055 460 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 CDKL1Q00532 357 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 FOLH1Q04609 750 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 SIGLEC14Q08ET2 396 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 LCP2Q13094 533 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 MTAPQ13126 283 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 SP140Q13342 867 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 TMED1Q13445 227 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 SPIDRQ14159 915 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 TRIP10Q15642 601 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 UGT3A2Q3SY77 523 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 SFT2D3Q587I9 215 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 TJAP1Q5JTD0 557 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 VWA5B1Q5TIE3 1220 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 ANKS6Q68DC2 871 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 FAM124AQ86V42 546 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 SATL1Q86VE3 508 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 PHYKPLQ8IUZ5 450 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 PGBD3Q8N328 593 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 TSTD1Q8NFU3 115 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 SLC26A7Q8TE54 656 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 DLG3Q92796 817 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 EXT2Q93063 718 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 DCUN1D1Q96GG9 259 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 HHIPQ96QV1 700 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 FAM126AQ9BYI3 521 aaPredicted RBP8.64□□□□□ -1.03
DDB1-213ENST00000539332 OCEL1Q9H607 264 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 MEAF6Q9HAF1 191 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 ITM2CQ9NQX7 267 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 USP36Q9P275 1121 aaKnown RBP8.64□□□□□ -1.03
DDB1-213ENST00000539332 PTBP2Q9UKA9 531 aaKnown RBP8.64□□□□□ -1.03
DDB1-213ENST00000539332 PCDHGA4Q9Y5G9 962 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 ST14Q9Y5Y6 855 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 LRP4O75096 1905 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 SPAG17Q6Q759 2223 aa8.64□□□□□ -1.03
DDB1-213ENST00000539332 A0A0J9YVX5 310 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 PRR23AA6NEV1 266 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 PRR5-ARHGAP8B1AHC4 643 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TMEM233B4DJY2 109 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 H3BNX3 289 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 GFYI3L273 518 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 K7ESM1 405 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 E2F3O00716 465 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 VILLO15195 856 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 RAD51BO15315 384 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 SLC16A5O15375 505 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 FFAR2O15552 330 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 PDGFBP01127 241 aaPredicted RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 IGLV3-19P01714 112 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 FTH1P02794 183 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 DCNP07585 359 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 ENO2P09104 434 aaPredicted RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 ETS2P15036 469 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 MSH3P20585 1137 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 AKT1P31749 480 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ACSL1P33121 698 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 AGTR2P50052 363 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 AQP4P55087 323 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 RPS21P63220 83 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 SH3BP2P78314 561 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ARHGAP8P85298 464 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 CLCQ05315 142 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 KANK2Q63ZY3 851 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 KIAA1161Q6NSJ0 714 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TTC23LQ6PF05 361 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ADAMTSL4Q6UY14 1074 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 RBM44Q6ZP01 1051 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.63□□□□□ -1.03
DDB1-213ENST00000539332 CHCHD4Q8N4Q1 142 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 AFAP1L2Q8N4X5 818 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 RASGEF1AQ8N9B8 481 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ADCY4Q8NFM4 1077 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 PRR7Q8TB68 274 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 EDAQ92838 391 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 NMD3Q96D46 503 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 COX14Q96I36 57 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 FRMD6Q96NE9 622 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 NSUN5Q96P11 429 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 OR52B2Q96RD2 323 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ZNF382Q96SR6 550 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms