RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SSX4O60224 188 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 RNASEH1O60930 286 aaKnown RBP4.02□□□□□ -1.77
CCDC7-209ENST00000539197 DDHD2O94830 711 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 PSMA4P25789 261 aaKnown RBP4.02□□□□□ -1.77
CCDC7-209ENST00000539197 SUOXP51687 545 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 MTF1Q14872 753 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 RTN4RL2Q86UN3 420 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 TEX11Q8IYF3 940 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 OR2AJ1Q8NGZ0 328 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 MORC4Q8TE76 937 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 ATP8B4Q8TF62 1192 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 OR6C1Q96RD1 312 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 ZNF577Q9BSK1 485 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 SH2D4AQ9H788 454 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 MAN2C1Q9NTJ4 1040 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 NDE1Q9NXR1 346 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 CELA1Q9UNI1 258 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 FRMD3A2A2Y4 597 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 AGR2O95994 175 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 PRLRP16471 622 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 GABRB1P18505 474 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 LHCGRP22888 699 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 PON1P27169 355 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 PRAMEP78395 509 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 GCNT1Q02742 428 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 ZFP36L1Q07352 338 aaKnown RBP4.01□□□□□ -1.77
CCDC7-209ENST00000539197 PDLIM3Q53GG5 364 aaPredicted RBP4.01□□□□□ -1.77
CCDC7-209ENST00000539197 KLHL35Q6PF15 583 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 KIF6Q6ZMV9 814 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 COMMD2Q86X83 199 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 TICAM1Q8IUC6 712 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 C10orf90Q96M02 699 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 CMTM3Q96MX0 182 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 CHMP1AQ9HD42 196 aaPredicted RBP4.01□□□□□ -1.77
CCDC7-209ENST00000539197 P4HTMQ9NXG6 502 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 CLIP2Q9UDT6 1046 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 DAPK2Q9UIK4 370 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 TNNQ9UQP3 1299 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 SESN1Q9Y6P5 492 aa4.01□□□□□ -1.77
CCDC7-209ENST00000539197 AVILO75366 819 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 OR2C1O95371 312 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 FOLR2P14207 255 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 TPD52P55327 224 aaPredicted RBP4□□□□□ -1.77
CCDC7-209ENST00000539197 PXKQ7Z7A4 578 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 MCEMP1Q8IX19 187 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 CEP57L1Q8IYX8 460 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 ARHGAP24Q8N264 748 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 TOMM40LQ969M1 308 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 OR2B2Q9GZK3 357 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 DPAGT1Q9H3H5 408 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 CSNK1G3Q9Y6M4 447 aa4□□□□□ -1.77
CCDC7-209ENST00000539197 IGKV6D-21A0A0A0MT36 114 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 EIF3JO75822 258 aaKnown RBP3.99□□□□□ -1.77
CCDC7-209ENST00000539197 SEC24AO95486 1093 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 VTNP04004 478 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 BCL3P20749 454 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 IL4RP24394 825 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 TSFMP43897 325 aaKnown RBP3.99□□□□□ -1.77
CCDC7-209ENST00000539197 RPL21P46778 160 aaKnown RBP3.99□□□□□ -1.77
CCDC7-209ENST00000539197 MAZP56270 477 aaKnown RBP3.99□□□□□ -1.77
CCDC7-209ENST00000539197 GUCY2DQ02846 1103 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 CD300CQ08708 224 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 KRT33BQ14525 404 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 SPDYCQ5MJ68 293 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 INTS8Q75QN2 995 aaKnown RBP3.99□□□□□ -1.77
CCDC7-209ENST00000539197 CATSPERDQ86XM0 798 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 SMAP1Q8IYB5 467 aaPredicted RBP3.99□□□□□ -1.77
CCDC7-209ENST00000539197 CFAP206Q8IYR0 622 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 ABHD12Q8N2K0 398 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 OR11H4Q8NGC9 324 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 OR52N5Q8NH56 324 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 CHPT1Q8WUD6 406 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 RFFLQ8WZ73 363 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 PDLIM5Q96HC4 596 aaKnown RBP3.99□□□□□ -1.77
CCDC7-209ENST00000539197 BTBD10Q9BSF8 475 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 URM1Q9BTM9 101 aaKnown RBP3.99□□□□□ -1.77
CCDC7-209ENST00000539197 THAP2Q9H0W7 228 aa3.99□□□□□ -1.77
CCDC7-209ENST00000539197 A0A1B0GVC2 190 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 EPHB6O15197 1021 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 TPD52L2O43399 206 aaKnown RBP3.98□□□□□ -1.77
CCDC7-209ENST00000539197 XRCC3O43542 346 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 CREG1O75629 220 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 RNASEH2AO75792 299 aaKnown RBP3.98□□□□□ -1.77
CCDC7-209ENST00000539197 WDPCPO95876 746 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 THEGLP0DJG4 465 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 HLA-FP30511 346 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 PPARGP37231 505 aaPredicted RBP3.98□□□□□ -1.77
CCDC7-209ENST00000539197 CSNK2BP67870 215 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 KCNC3Q14003 757 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 TNIP1Q15025 636 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 HERC3Q15034 1050 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 KCNMB4Q86W47 210 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 CDK20Q8IZL9 346 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 Q8N7P7 452 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 OR13C3Q8NGS6 347 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 MOSPD2Q8NHP6 518 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 FNDC11Q9BVV2 318 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 SPHK1Q9NYA1 384 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 ZNF510Q9Y2H8 683 aa3.98□□□□□ -1.77
CCDC7-209ENST00000539197 GLRA3O75311 464 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms