RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	KLK4	Q9Y5K2	254 aa		11.91	□□□□□ -0.5
CLTCL1-205	ENST00000538828	MAD1L1	Q9Y6D9	718 aa		11.91	□□□□□ -0.5
CLTCL1-205	ENST00000538828		A0A0J9YY10	115 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	FAM187A	A6NFU0	413 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SLC9B1P1	A6NJY1	282 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	IQCF5	A8MTL0	148 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	GOLGA8M	H3BSY2	632 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	RASGRF2	O14827	1237 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CPNE3	O75131	537 aa	Known RBP	11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SEC31A	O94979	1220 aa	Known RBP	11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	C1orf105	O95561	183 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CCNYL3	P0C7X3	344 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	EBLN1	P0CF75	366 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	LIF	P15018	202 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SKIV2L2	P42285	1042 aa	Known RBP	11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CRYM	Q14894	314 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	BRD3	Q15059	726 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	IZUMO3	Q5VZ72	239 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PCSK4	Q6UW60	755 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	MAATS1	Q7Z4T9	603 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	KRT222	Q8N1A0	295 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	AGGF1	Q8N302	714 aa	eCLIP	11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	ZBTB2	Q8N680	514 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	JPH3	Q8WXH2	748 aa	Predicted RBP	11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SLC39A7	Q92504	469 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SNF8	Q96H20	258 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	DPH2	Q9BQC3	489 aa	Predicted RBP	11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PHACTR1	Q9C0D0	580 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CCDC68	Q9H2F9	335 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	LHX9	Q9NQ69	397 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	INTS7	Q9NVH2	962 aa	Known RBP	11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	SOHLH2	Q9NX45	425 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	TUBD1	Q9UJT1	453 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	FBXO5	Q9UKT4	447 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	DHRS7	Q9Y394	339 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	AP1M2	Q9Y6Q5	423 aa		11.9	□□□□□ -0.5
CLTCL1-205	ENST00000538828	PCM1	Q15154	2024 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SNRNP200	O75643	2136 aa	Known RBP	11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	LOC101059948	A0A1B0GTJ6	334 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TARM1	B6A8C7	271 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828		E5RI56	91 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828		E7ESA3	106 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	AGRP	O00253	132 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PSIP1	O75475	530 aa	Known RBP	11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	KIAA0754	O94854	1291 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	MPC1L	P0DKB6	136 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ERG	P11308	486 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ST6GAL1	P15907	406 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	UGT2B7	P16662	529 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZNF28	P17035	718 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ITGB6	P18564	788 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CHRM3	P20309	590 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	FMO4	P31512	558 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CLCN7	P51798	805 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ARL4C	P56559	192 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GRB7	Q14451	532 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	KIAA1614	Q5VZ46	1190 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PWWP2B	Q6NUJ5	590 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	UGT3A1	Q6NUS8	523 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	VASH2	Q86V25	355 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	KCNMB4	Q86W47	210 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	C19orf47	Q8N9M1	422 aa	Known RBP	11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DENND1A	Q8TEH3	1009 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZUFSP	Q96AP4	578 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CAPZA3	Q96KX2	299 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	BBC3	Q96PG8	261 aa	Predicted RBP	11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	C17orf62	Q9BQA9	187 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ADNP	Q9H2P0	1102 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	FAM114A2	Q9NRY5	505 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	LNPEP	Q9UIQ6	1025 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CRYL1	Q9Y2S2	319 aa		11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TDRKH	Q9Y2W6	561 aa	Known RBP	11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CFAP46	Q8IYW2	2715 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	EIF4E1B	A6NMX2	242 aa	Known RBP	11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZNF839	A8K0R7	811 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GOLGA8K	D6RF30	607 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GOLGA8T	H3BQL2	631 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	FANCG	O15287	622 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PRICKLE3	O43900	615 aa	Predicted RBP	11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	NIPSNAP2	O75323	286 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SCRG1	O75711	98 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TUBB4A	P04350	444 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	KLK3	P07288	261 aa	Predicted RBP	11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CD63	P08962	238 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	RAB40AL	P0C0E4	278 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	WT1	P19544	449 aa	Predicted RBP	11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SLC1A2	P43004	574 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GABRA4	P48169	554 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ITGA1	P56199	1179 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DHX9	Q08211	1270 aa	Known RBP	11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ABR	Q12979	859 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	KCNAB1	Q14722	419 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	HIF1A	Q16665	826 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CYP2A13	Q16696	494 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TAF1B	Q53T94	588 aa	Predicted RBP	11.88	□□□□□ -0.51

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