RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 BPNT1O95861 308 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 CBSLP0DN79 551 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 CYP2A6P11509 494 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-210ENST00000538120 CBSP35520 551 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 NNMTP40261 264 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 ETV3P41162 512 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 GDF5P43026 501 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 ZFP36L2P47974 494 aaKnown RBP10.5□□□□□ -0.73
CLIP1-210ENST00000538120 NRIP1P48552 1158 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 MRPL19P49406 292 aaKnown RBP10.5□□□□□ -0.73
CLIP1-210ENST00000538120 STX1BP61266 288 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 TRAF3Q13114 568 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 DUSP6Q16828 381 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 KIF19Q2TAC6 998 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 POM121L1PQ3SYA9 428 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 ZNF805Q5CZA5 627 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 C6orf10Q5SRN2 563 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 PPP2R2DQ66LE6 453 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 KRT80Q6KB66 452 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 SERPINA13PQ6UXR4 307 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 MBOAT1Q6ZNC8 495 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 DET1Q7L5Y6 550 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 EFL1Q7Z2Z2 1120 aaKnown RBP10.5□□□□□ -0.73
CLIP1-210ENST00000538120 TECPR1Q7Z6L1 1165 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 MIER2Q8N344 545 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 FAM47BQ8NA70 645 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 OR4F6Q8NGB9 312 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 WFIKKN2Q8TEU8 576 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 UBTD2Q8WUN7 234 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 PPWD1Q96BP3 646 aaKnown RBP10.5□□□□□ -0.73
CLIP1-210ENST00000538120 APOL5Q9BWW9 433 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 RDH14Q9HBH5 336 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 AIG1Q9NVV5 245 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 SMOXQ9NWM0 555 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 DKK3Q9UBP4 350 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 GMEB1Q9Y692 573 aa10.5□□□□□ -0.73
CLIP1-210ENST00000538120 C16orf96A6NNT2 1141 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 FADS2P1A8MWK0 482 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 C9JVG2 144 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 MRASO14807 208 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 ZSCAN9O15535 394 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 MATN4O95460 622 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 ADH1CP00326 375 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 CAPN1P07384 714 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 ATP1B2P14415 290 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 CAPN3P20807 821 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 ENTPD1P49961 510 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 CDK9P50750 372 aaKnown RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 METAP1P53582 386 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 DCDC1P59894 354 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 YBX1P67809 324 aaKnown RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 ZXDCQ2QGD7 858 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 TTLL9Q3SXZ7 439 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 SULT1C3Q6IMI6 304 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 HACD2Q6Y1H2 254 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 DPPA4Q7L190 304 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 SPATA19Q7Z5L4 167 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 ERI1Q8IV48 349 aaKnown RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 VRK3Q8IV63 474 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 SFRP1Q8N474 314 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 CANT1Q8WVQ1 401 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 TEX37Q96LM6 180 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 ASB16Q96NS5 453 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 SAMD11Q96NU1 681 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 OSBPL11Q9BXB4 747 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 CD244Q9BZW8 370 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 IPPKQ9H8X2 491 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 SUCOQ9UBS9 1254 aaKnown RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 CIDEBQ9UHD4 219 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 CNOT6Q9ULM6 557 aaKnown RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 TMCC3Q9ULS5 477 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 MYRFQ9Y2G1 1151 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 PRRC2BQ5JSZ5 2229 aaKnown RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 SPINT1O43278 529 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 CHEK2O96017 543 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 OR56A5P0C7T3 313 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 VPS26BQ4G0F5 336 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 NHSL2Q5HYW2 709 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 ZNF648Q5T619 568 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 HENMT1Q5T8I9 393 aaKnown RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 PARS2Q7L3T8 475 aaKnown RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 SFTPA1Q8IWL2 248 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 ALDH16A1Q8IZ83 802 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 BPIFB1Q8TDL5 484 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 HCAR2Q8TDS4 363 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 RMND5BQ96G75 393 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 LRIG1Q96JA1 1093 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 HAUS8Q9BT25 410 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 DCUN1D5Q9BTE7 237 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 RIOK2Q9BVS4 552 aaKnown RBP10.49□□□□□ -0.73
CLIP1-210ENST00000538120 CD300AQ9UGN4 299 aa10.49□□□□□ -0.73
CLIP1-210ENST00000538120 TCRBV3S1A0A5B6 114 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 FAM149AA5PLN7 773 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 SAC3D1A6NKF1 404 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 NR5A2O00482 541 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 KATNA1O75449 491 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 CLIC3O95833 236 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 IDO1P14902 403 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 MMP12P39900 470 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms