RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 PRAMEP78395 509 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 DCDP81605 110 aaKnown RBP9.34□□□□□ -0.91
CHD4-207ENST00000537634 RAPSNQ13702 412 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 KIR2DS3Q14952 304 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 ZIC1Q15915 447 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 DNAJC21Q5F1R6 531 aaKnown RBP9.34□□□□□ -0.91
CHD4-207ENST00000537634 TSTD2Q5T7W7 516 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 FHL5Q5TD97 284 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 VWA5B1Q5TIE3 1220 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 RHBDD2Q6NTF9 364 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 JMJD6Q6NYC1 403 aaPredicted RBP9.34□□□□□ -0.91
CHD4-207ENST00000537634 TLDC1Q6P9B6 456 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 NLRP9Q7RTR0 991 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 ZNF655Q8N720 491 aaPredicted RBP9.34□□□□□ -0.91
CHD4-207ENST00000537634 GLIS1Q8NBF1 620 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 CLEC1AQ8NC01 280 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 OR13J1Q8NGT2 312 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 OR6P1Q8NGX9 317 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 HES6Q96HZ4 224 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 FER1L6-AS2Q96M78 137 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 GBP5Q96PP8 586 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 PSMG3-AS1Q96PY0 264 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 RANBP9Q96S59 729 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 NDC1Q9BTX1 674 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 AP1M1Q9BXS5 423 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 MFRPQ9BY79 579 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 FRMD8P1Q9BZ68 369 aaPredicted RBP9.34□□□□□ -0.91
CHD4-207ENST00000537634 SLC29A3Q9BZD2 475 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 SPRTNQ9H040 489 aaPredicted RBP9.34□□□□□ -0.91
CHD4-207ENST00000537634 RBSNQ9H1K0 784 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 ETNK1Q9HBU6 452 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 LUZP4Q9P127 313 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 MAP10Q9P2G4 905 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 IFT80Q9P2H3 777 aaPredicted RBP9.34□□□□□ -0.91
CHD4-207ENST00000537634 DHCR7Q9UBM7 475 aaKnown RBP9.34□□□□□ -0.91
CHD4-207ENST00000537634 SLC2A6Q9UGQ3 507 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 RIMKLBQ9ULI2 386 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 ZNF148Q9UQR1 794 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 PTRH2Q9Y3E5 179 aaKnown RBP9.34□□□□□ -0.91
CHD4-207ENST00000537634 MAP4K5Q9Y4K4 846 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 CAPN6Q9Y6Q1 641 aa9.34□□□□□ -0.91
CHD4-207ENST00000537634 SHANK1Q9Y566 2161 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 A0A0U1RQJ8 604 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 H3BMH7 237 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 HCRTR1O43613 425 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 LIASO43766 372 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 KLF7O75840 302 aaPredicted RBP9.33□□□□□ -0.92
CHD4-207ENST00000537634 SUN1O94901 812 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 IGHEP01854 428 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 APOA4P06727 396 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 TPBGLP0DKB5 382 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 ADRA1DP25100 572 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 PKLRP30613 574 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 GABRA4P48169 554 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 RAB28P51157 221 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 HSPA14Q0VDF9 509 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 SSPNQ14714 243 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 SLC9A5Q14940 896 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 TMED2Q15363 201 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 OASLQ15646 514 aaKnown RBP9.33□□□□□ -0.92
CHD4-207ENST00000537634 INPP5JQ15735 1006 aaPredicted RBP9.33□□□□□ -0.92
CHD4-207ENST00000537634 NKAIN1Q4KMZ8 207 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 FASTKD1Q53R41 847 aaKnown RBP9.33□□□□□ -0.92
CHD4-207ENST00000537634 PRR30Q53SZ7 412 aaPredicted RBP9.33□□□□□ -0.92
CHD4-207ENST00000537634 AARS2Q5JTZ9 985 aaKnown RBP9.33□□□□□ -0.92
CHD4-207ENST00000537634 SLC6A19Q695T7 634 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 TMEM139Q8IV31 216 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 DCUN1D3Q8IWE4 304 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 SLC22A15Q8IZD6 547 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 CCDC89Q8N998 374 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 PPHLN1Q8NEY8 458 aaKnown RBP9.33□□□□□ -0.92
CHD4-207ENST00000537634 OR2Y1Q8NGV0 311 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 OR4L1Q8NH43 312 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 FLVCR1-AS1Q8TAF5 88 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 ASZ1Q8WWH4 475 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 DLG3Q92796 817 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 PNPLA2Q96AD5 504 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 SMAD5Q99717 465 aaKnown RBP9.33□□□□□ -0.92
CHD4-207ENST00000537634 RAB6BQ9NRW1 208 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 C5AR2Q9P296 337 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 ANAPC5Q9UJX4 755 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 PLCL2Q9UPR0 1127 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 CDYLQ9Y232 598 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 PCSK5Q92824 1860 aa9.33□□□□□ -0.92
CHD4-207ENST00000537634 CCDC88CQ9P219 2028 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 RP1L1Q8IWN7 2480 aaPredicted RBP9.32□□□□□ -0.92
CHD4-207ENST00000537634 NUP210LQ5VU65 1888 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 KLHL41O60662 606 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 APRTP07741 180 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 MAGP20916 626 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 PEBP1P30086 187 aaKnown RBP9.32□□□□□ -0.92
CHD4-207ENST00000537634 CCR7P32248 378 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 GRIA1P42261 906 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 ACVR1Q04771 509 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 SNX1Q13596 522 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 CYP2A13Q16696 494 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 DCAF10Q5QP82 559 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 UNC5DQ6UXZ4 953 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 ZNF534Q76KX8 674 aa9.32□□□□□ -0.92
CHD4-207ENST00000537634 TAX1BP1Q86VP1 789 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms