RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 OR2A14Q96R47 310 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RAD9AQ99638 391 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RACGAP1Q9H0H5 632 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 PPIL3Q9H2H8 161 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CERS4Q9HA82 394 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 HPF1Q9NWY4 346 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 SLC39A10Q9ULF5 831 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ST3GAL5Q9UNP4 418 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 PSAT1Q9Y617 370 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 EP400Q96L91 3159 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 IGLV3-22A0A075B6J6 115 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CYP11A1P05108 521 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CFHP08603 1231 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 MGAT1P26572 445 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 PRKAR1BP31321 381 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 GLRBP48167 497 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 MCCD1P59942 119 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RBP5P82980 135 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 IRF9Q00978 393 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CDK5R2Q13319 367 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 UGCGQ16739 394 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 TIGD5Q53EQ6 642 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 TMEM151BQ8IW70 566 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 MIER2Q8N344 545 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF606Q8WXB4 792 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ASB15Q8WXK1 588 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 SLC23A1Q9UHI7 598 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ENOPH1Q9UHY7 261 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ADAM30Q9UKF2 790 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 USP18Q9UMW8 372 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 EFCAB10A6NFE3 127 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 FMO3P31513 532 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RPL9P32969 192 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 NUP62P37198 522 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ARL4AP40617 200 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 MAGEA3P43357 314 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 SSTP61278 116 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 C6orf132Q5T0Z8 1188 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF691Q5VV52 312 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 GDF6Q6KF10 455 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CNSTQ6PJW8 725 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 YAF2Q8IY57 180 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 KDM1BQ8NB78 822 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 RBPMSQ93062 196 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 PPP1R2P1Q96PQ5 205 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 DCLRE1CQ96SD1 692 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 PELOQ9BRX2 385 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 PITHD1Q9GZP4 211 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CATSPERBQ9H7T0 1116 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 BRD7Q9NPI1 651 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CATSPERZQ9NTU4 200 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 CD274Q9NZQ7 290 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 UBQLN2Q9UHD9 624 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 HSPE1-MOB4S4R3N1 261 aa10.67□□□□□ -0.7
CLSTN3-207ENST00000537408 C2orf81A6NN90 581 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 TMEM233B4DJY2 109 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 GSTA4O15217 222 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 RETP07949 1114 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 HMGCLP35914 325 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 HOXA1P49639 335 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 GPM6BQ13491 265 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 TIMM50Q3ZCQ8 353 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 PDZK1Q5T2W1 519 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 CDH26Q8IXH8 852 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 ATAD1Q8NBU5 361 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 ZMIZ2Q8NF64 920 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 CNIH3Q8TBE1 160 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 TEX47Q8TBZ9 253 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 FOPNLQ96NB1 174 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 EVA1BQ9NVM1 165 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 PADI3Q9ULW8 664 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 CACNG2Q9Y698 323 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 NAV1Q8NEY1 1877 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 CEP290O15078 2479 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 A0A1B0GVM2 712 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 F8W036 122 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 H3BQ06 376 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 STX16O14662 325 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 PRMT5O14744 637 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 NOBOXO60393 691 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 ADAMTS4O75173 837 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 ALPPP05187 535 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 SLC2A3P11169 496 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 CA5AP35218 305 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 ETV6P41212 452 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 PPP3CCP48454 512 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 EEFSECP57772 596 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 USP10Q14694 798 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 POU4F3Q15319 338 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 SYT16Q17RD7 645 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 FUT11Q495W5 492 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 SPESP1Q6UW49 350 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 MPZL3Q6UWV2 235 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 TMPRSS11AQ6ZMR5 421 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 LUZP2Q86TE4 346 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 OR4M2Q8NGB6 313 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 OR4M1Q8NGD0 313 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 PTP4A1Q93096 173 aa10.66□□□□□ -0.7
CLSTN3-207ENST00000537408 CAB39LQ9H9S4 337 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms