RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 ABRAXAS1Q6UWZ7 409 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 CCL4L1Q8NHW4 92 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 RFWD2Q8NHY2 731 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 GPBAR1Q8TDU6 330 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 FAR2Q96K12 515 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 FERD3LQ96RJ6 166 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 IMP3Q9NV31 184 aaKnown RBP22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 VTI1BQ9UEU0 232 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 TBC1D29Q9UFV1 150 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 APOBEC3BQ9UH17 382 aaKnown RBP22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 PCOLCE2Q9UKZ9 415 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 TDRKHQ9Y2W6 561 aaKnown RBP22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 USH1CQ9Y6N9 552 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 A0A0G2JND7 137 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 UBFD1O14562 309 aaKnown RBP22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 VILLO15195 856 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 KATNA1O75449 491 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 WDR47O94967 919 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 EPB42P16452 691 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 JUNDP17535 347 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 IMPA1P29218 277 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 C21orf59P57076 290 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 CLCA4Q14CN2 919 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 TEAD4Q15561 434 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 ZNF542PQ5EBM4 170 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 RAB42Q8N4Z0 105 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 AGAP11Q8TF27 550 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 ATP6V1E2Q96A05 226 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 ZNF382Q96SR6 550 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 ATG10Q9H0Y0 220 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 MVB12BQ9H7P6 319 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 ZBTB26Q9HCK0 441 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 CIDEBQ9UHD4 219 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 POLG2Q9UHN1 485 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 KLF15Q9UIH9 416 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 ARL2BPQ9Y2Y0 163 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 ZDBF2Q9HCK1 2354 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 PRR5-ARHGAP8B1AHC4 643 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 OTCP00480 354 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 ARL1P40616 181 aaPredicted RBP22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 ARFIP2P53365 341 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 PKNOX1P55347 436 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 NXPH1P58417 271 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 SH3BP2P78314 561 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 SRSF5Q13243 272 aaKnown RBP22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 RPE65Q16518 533 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 NRROSQ86YC3 692 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 SYTL1Q8IYJ3 562 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 MED8Q96G25 268 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 PLCD4Q9BRC7 762 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 TCEAL2Q9H3H9 227 aaPredicted RBP22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 NOL11Q9H8H0 719 aaKnown RBP22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 IPPKQ9H8X2 491 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 KCNK4Q9NYG8 393 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 LNPEPQ9UIQ6 1025 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 COLEC10Q9Y6Z7 277 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 GON4LQ3T8J9 2241 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 SPAG17Q6Q759 2223 aa22.28■■□□□ 1.16
RBFOX1-206ENST00000535565 TDRD6O60522 2096 aaKnown RBP22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 ZNF839A8K0R7 811 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 KDM1AO60341 852 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 CRCPO75575 148 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 ESRRBO95718 433 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 CSF2P04141 144 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 MTHFD1P11586 935 aaKnown RBP22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 GNSP15586 552 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 ITPKAP23677 461 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 CNR2P34972 360 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 HSD17B2P37059 387 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 CCNG1P51959 295 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 AQP5P55064 265 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 DUS1LQ6P1R4 473 aaKnown RBP22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 GPRIN3Q6ZVF9 776 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 SPATS2Q86XZ4 545 aaKnown RBP22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 SNX31Q8N9S9 440 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 ZNF480Q8WV37 535 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 C10orf82Q8WW14 230 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 PYCR2Q96C36 320 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 DNAJC11Q9NVH1 559 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 SPATA7Q9P0W8 599 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 TRAF6Q9Y4K3 522 aa22.27■■□□□ 1.16
RBFOX1-206ENST00000535565 OR52A4PA6NMU1 304 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 MATN2O00339 956 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 PPP6CO00743 305 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 HDAC3O15379 428 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 F3P13726 295 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 NME1P15531 152 aaKnown RBP22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 ALOX15P16050 662 aaPredicted RBP22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 NDUFS1P28331 727 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 CSNK1EP49674 416 aaKnown RBP22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 PNLIPRP1P54315 467 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 PRKG2Q13237 762 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 NAE1Q13564 534 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 ARHGAP19Q14CB8 494 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 ZXDCQ2QGD7 858 aaPredicted RBP22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 TAF8Q7Z7C8 310 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 KLHDC8AQ8IYD2 350 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 OR56A3Q8NH54 315 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 TMEM120AQ9BXJ8 343 aa22.26■■□□□ 1.15
RBFOX1-206ENST00000535565 STN1Q9H668 368 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms