RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 GDI2P50395 445 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 GHRHRQ02643 423 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 E2F2Q14209 437 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 DPY19L1Q2PZI1 675 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 PHF19Q5T6S3 580 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 HGSNATQ68CP4 663 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 KCTD8Q6ZWB6 473 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 CHERPQ8IWX8 916 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 ANKFN1Q8N957 763 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 NLGN2Q8NFZ4 835 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 B3GALT6Q96L58 329 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 GATA5Q9BWX5 397 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 TMA7Q9Y2S6 64 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 ARVCFO00192 962 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 NOL4O94818 638 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 ETS2P15036 469 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 MAGP20916 626 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 TARDBPQ13148 414 aaKnown RBP eCLIP17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 TNFAIP8L3Q5GJ75 292 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 CCDC80Q76M96 950 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 CAND1Q86VP6 1230 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 CBR4Q8N4T8 237 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 GTPBP2Q9BX10 602 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 TVP23BQ9NYZ1 205 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 CACNG4Q9UBN1 327 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.44
SFSWAP-203ENST00000535236 IGLV3-22A0A075B6J6 115 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 CAPN14A8MX76 684 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 CXCR1P25024 350 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 GALK1P51570 392 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 CRHR2Q13324 411 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 QPCTQ16769 361 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 MTMR14Q8NCE2 650 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 TFB2MQ9H5Q4 396 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 PCDHGB7Q9Y5F8 929 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 A0A0G2JN53 185 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 ZNF20P17024 532 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 RPS24P62847 133 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 TLE2Q04725 743 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 OR6K6Q8NGW6 343 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 PCDH19Q8TAB3 1148 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 CLEC4CQ8WTT0 213 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 HTRA1Q92743 480 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 ZNF599Q96NL3 588 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 ZDHHC3Q9NYG2 299 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 WASHC1A8K0Z3 465 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 WASH3PC4AMC7 463 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 PBX1P40424 430 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 WASH2PQ6VEQ5 465 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 DNAJB8Q8NHS0 232 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 DCAKDQ8WVC6 231 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 DGCR14Q96DF8 476 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 LGR4Q9BXB1 951 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 CSNK2A2P19784 350 aaPredicted RBP17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 TXNL4AP83876 142 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 TMEM44Q2T9K0 475 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 RAB43Q86YS6 212 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 OVCA2Q8WZ82 227 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 ADAM7Q9H2U9 754 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 FZD8Q9H461 694 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 SLC10A7Q0GE19 358 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 SLBPQ14493 270 aaKnown RBP eCLIP17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 ZMYND11Q15326 602 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 SLC51AQ86UW1 340 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 CELF5Q8N6W0 485 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 FAM13CQ8NE31 585 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 UFD1Q92890 307 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 SSU72Q9NP77 194 aaKnown RBP17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 DTLQ9NZJ0 730 aa17.82■□□□□ 0.44
SFSWAP-203ENST00000535236 IDH3AP50213 366 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 CLCN4P51793 760 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 TAS2R39P59534 338 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 MXD1Q05195 221 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 RAB30Q15771 203 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 KLHL22Q53GT1 634 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 ADGRF1Q5T601 910 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 CNKSR3Q6P9H4 555 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 SLC29A4Q7RTT9 530 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 IQCHQ86VS3 1027 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 IRF2BP1Q8IU81 584 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 AUTS2Q8WXX7 1259 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 SGCDQ92629 289 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 FANCFQ9NPI8 374 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 ITM2CQ9NQX7 267 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 THUMPD1Q9NXG2 353 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 DAPL1A0PJW8 107 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 TRMUO75648 421 aaKnown RBP17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 NFKB2Q00653 900 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 MADCAM1Q13477 382 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 PLA2G15Q8NCC3 412 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 RGMAQ96B86 450 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 MNTQ99583 582 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 PFDN2Q9UHV9 154 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 H0YGN5 161 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 CBFA2T3O75081 653 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 PIM1P11309 404 aaPredicted RBP17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 CCL14Q16627 93 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 SYVN1Q86TM6 617 aa17.81■□□□□ 0.44
SFSWAP-203ENST00000535236 IFNL1Q8IU54 200 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms