RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 FARSAQ9Y285 508 aaKnown RBP10.09□□□□□ -0.79
CAPN1-225ENST00000533704 KLHL20Q9Y2M5 609 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 JRKLQ9Y4A0 524 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 PCDHGA6Q9Y5G7 932 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 KCNMB2Q9Y691 235 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 HEATR5BQ9P2D3 2071 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 BOD1L1Q8NFC6 3051 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 MDC1Q14676 2089 aaKnown RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 TENM4Q6N022 2769 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 A0A0J9YY10 115 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 PGRMC1O00264 195 aaKnown RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 ZNF749O43361 778 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 GPC4O75487 556 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 OR2B3O76000 313 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 TMEM63AO94886 807 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 NR1D1P20393 614 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 AOAHP28039 575 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 PEBP1P30086 187 aaKnown RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 PKLRP30613 574 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 COILP38432 576 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 BDKRB1P46663 353 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 RAB28P51157 221 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 CDK16Q00536 496 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 CHAF1BQ13112 559 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 IL10RAQ13651 578 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 KCNJ11Q14654 390 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 CRTC2Q53ET0 693 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 LACTB2Q53H82 288 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 C1orf189Q5VU69 101 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 FAM69BQ5VUD6 431 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 LCN10Q6JVE6 187 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 TTC23LQ6PF05 361 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 CNSTQ6PJW8 725 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 CCDC137Q6PK04 289 aaKnown RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 UNC5DQ6UXZ4 953 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 DCUN1D3Q8IWE4 304 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 SYTL1Q8IYJ3 562 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 DSELQ8IZU8 1212 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 ENDOVQ8N8Q3 282 aaKnown RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 COG1Q8WTW3 980 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 ZNF669Q96BR6 464 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 TCTN2Q96GX1 697 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 NAP1L3Q99457 506 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 TRIM56Q9BRZ2 755 aaKnown RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 KIFC1Q9BW19 673 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 GPR87Q9BY21 358 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 SPRTNQ9H040 489 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 P2RY12Q9H244 342 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 MRM3Q9HC36 420 aaKnown RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 PCMTD2Q9NV79 361 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 TRMT1Q9NXH9 659 aaKnown RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 IL1RAPL1Q9NZN1 696 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 TUBD1Q9UJT1 453 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 SLC39A10Q9ULF5 831 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 SNX7Q9UNH6 387 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 RUVBL2Q9Y230 463 aaKnown RBP10.08□□□□□ -0.8
CAPN1-225ENST00000533704 CDYLQ9Y232 598 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 TP53TG5Q9Y2B4 290 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 CRYL1Q9Y2S2 319 aa10.08□□□□□ -0.8
CAPN1-225ENST00000533704 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.07□□□□□ -0.8
CAPN1-225ENST00000533704 KRT87PA6NCN2 255 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 ARGFXA6NJG6 315 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 C9J4A7 227 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 MKRN2OSH3BPM6 223 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 KPNA5O15131 536 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 PFDN6O15212 129 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 ZSCAN12O43309 604 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 SUV39H1O43463 412 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 HCRTR1O43613 425 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 KIF5CO60282 957 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 NIPSNAP2O75323 286 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 RFPL1O75677 317 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 DNAJB5O75953 348 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 F7P08709 466 aaPredicted RBP10.07□□□□□ -0.8
CAPN1-225ENST00000533704 PAMP19021 973 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 CHRM3P20309 590 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 MAGP20916 626 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 AGXTP21549 392 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 ARNTP27540 789 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 KIR2DS3Q14952 304 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 ZIC1Q15915 447 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 KYNUQ16719 465 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 UGT8Q16880 541 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 ZNF789Q5FWF6 425 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 CTSL3PQ5NE16 218 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 CPZQ66K79 652 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 KIAA0930Q6ICG6 404 aaPredicted RBP10.07□□□□□ -0.8
CAPN1-225ENST00000533704 SYVN1Q86TM6 617 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 CAND1Q86VP6 1230 aaKnown RBP10.07□□□□□ -0.8
CAPN1-225ENST00000533704 LRRC6Q86X45 466 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 REXO1L1PQ8IX06 675 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 RASGEF1CQ8N431 466 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 ZNF655Q8N720 491 aaPredicted RBP10.07□□□□□ -0.8
CAPN1-225ENST00000533704 FLVCR1-AS1Q8TAF5 88 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 LRFN5Q96NI6 719 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 OSBPL9Q96SU4 736 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 TLK1Q9UKI8 766 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 NFS1Q9Y697 457 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 MAD1L1Q9Y6D9 718 aa10.07□□□□□ -0.8
CAPN1-225ENST00000533704 FLNBO75369 2602 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms