RNA–Protein interactions for RNA: ENST00000533253.1

AP003390.1-201, humanhuman

TSL 5 BASIC

Gene AP003390.1, Length 523 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003390.1-201ENST00000533253 MED13Q9UHV7 2174 aa13.29□□□□□ -0.28
AP003390.1-201ENST00000533253 BSNQ9UPA5 3926 aa13.29□□□□□ -0.28
AP003390.1-201ENST00000533253 BOD1L1Q8NFC6 3051 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 ZCWPW2A0A1B0GU75 182 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 CPNE3O75131 537 aaKnown RBP13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 SCRG1O75711 98 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 USP1O94782 785 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 RECKO95980 971 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 NTRK1P04629 796 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 SFTPCP11686 197 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 UGT2B7P16662 529 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 TCN2P20062 427 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 PKLRP30613 574 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 FMO4P31512 558 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 PTGIRP43119 386 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 RAB28P51157 221 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 CDC20Q12834 499 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 PTK6Q13882 451 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 COL9A2Q14055 689 aaPredicted RBP13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 GRB7Q14451 532 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 KIR2DS3Q14952 304 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 SLC5A12Q1EHB4 618 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 RNASEH2BQ5TBB1 312 aaKnown RBP13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 BORAQ6PGQ7 559 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 CENPUQ71F23 418 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 PCGF5Q86SE9 256 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 CREG2Q8IUH2 290 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 TMEM126BQ8IUX1 230 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 LMNTD2Q8IXW0 634 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 CFAP61Q8NHU2 1237 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 RNF31Q96EP0 1072 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 LRFN5Q96NI6 719 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 NAPGQ99747 312 aaPredicted RBP13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 MENTQ9BUN1 341 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 SPHK1Q9NYA1 384 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 SERTAD3Q9UJW9 196 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 PLAGL1Q9UM63 463 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 CRYL1Q9Y2S2 319 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 MRFAP1Q9Y605 127 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 SAR1BQ9Y6B6 198 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 SPTA1P02549 2419 aa13.28□□□□□ -0.28
AP003390.1-201ENST00000533253 A0A0J9YY10 115 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 C21orf140B9A014 251 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 TMEM150CB9EJG8 249 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 DNALI1O14645 258 aaPredicted RBP13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 URI1O94763 535 aaPredicted RBP13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 S1PR4O95977 384 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 PKMP14618 531 aaKnown RBP13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 PVRP15151 417 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 ATP5DP30049 168 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 DNASE1L3Q13609 305 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 THOC5Q13769 683 aaKnown RBP13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 GBX1Q14549 363 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 ZNF789Q5FWF6 425 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 TTC23LQ6PF05 361 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 ZNF517Q6ZMY9 492 aaPredicted RBP13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 CDHR3Q6ZTQ4 885 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 AGGF1Q8N302 714 aaeCLIP13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 C19orf47Q8N9M1 422 aaKnown RBP13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 OR1L3Q8NH93 324 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 CT55Q8WUE5 264 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 RAD51AP1Q96B01 352 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 TCTN2Q96GX1 697 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 RUNDC3BQ96NL0 473 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 GPR87Q9BY21 358 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 ASIC3Q9UHC3 531 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 MRPS18BQ9Y676 258 aaKnown RBP13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 MAD1L1Q9Y6D9 718 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 FAM169AQ9Y6X4 670 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 ZNF462Q96JM2 2506 aa13.27□□□□□ -0.29
AP003390.1-201ENST00000533253 HELZ2Q9BYK8 2649 aaKnown RBP13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 GCN1Q92616 2671 aaKnown RBP13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 CTAGE9A4FU28 777 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 ISM1B1AKI9 464 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 RASGRF2O14827 1237 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 NIPSNAP2O75323 286 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 MATN4O95460 622 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 C1orf105O95561 183 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 CHRM3P20309 590 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 CD9P21926 228 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 IVDP26440 423 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 OAS2P29728 719 aaKnown RBP13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 PEBP1P30086 187 aaKnown RBP13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 CCNFP41002 786 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 ITGA1P56199 1179 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 LONRF1Q17RB8 773 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 ZNF470Q6ECI4 717 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 SYDE1Q6ZW31 735 aaPredicted RBP13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 TRIM73Q86UV7 250 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 LINC01555Q8NAE3 123 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 SLC38A9Q8NBW4 561 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 OR2L8Q8NGY9 312 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 CALML6Q8TD86 181 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 SLC22A18Q96BI1 424 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 CAPZA3Q96KX2 299 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 FOPNLQ96NB1 174 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 RAB11FIP5Q9BXF6 653 aa13.26□□□□□ -0.29
AP003390.1-201ENST00000533253 KLHL25Q9H0H3 589 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms