RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 IRAK1BP1Q5VVH5 260 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 AGAP6Q5VW22 663 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 TCEAL6Q6IPX3 200 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 BRAT1Q6PJG6 821 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 Q6ZVL8 140 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 CAMKMTQ7Z624 323 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 PSTKQ8IV42 348 aaKnown RBP5.4□□□□□ -1.54
CD44-236ENST00000533222 CMTR2Q8IYT2 770 aaKnown RBP5.4□□□□□ -1.54
CD44-236ENST00000533222 PRR18Q8N4B5 295 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 TRAM1L1Q8N609 369 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 IL17RCQ8NAC3 791 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 CAMKVQ8NCB2 501 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 OR6X1Q8NH79 312 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 PAQR8Q8TEZ7 354 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 SNX33Q8WV41 574 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 ESR2Q92731 530 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 HOXB13Q92826 284 aaPredicted RBP5.4□□□□□ -1.54
CD44-236ENST00000533222 RAB24Q969Q5 203 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 HDAC10Q969S8 669 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 RILPL2Q969X0 211 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 TMEM143Q96AN5 459 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 ECHDC3Q96DC8 303 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 RNF31Q96EP0 1072 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 TMEM176AQ96HP8 235 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 AGAP4Q96P64 663 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 OR14A2Q96R54 314 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 SERPINI1Q99574 410 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 SARGQ9BW04 601 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 GTPBP2Q9BX10 602 aaKnown RBP5.4□□□□□ -1.54
CD44-236ENST00000533222 SLC2A11Q9BYW1 496 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 TXLNGYQ9BZA5 131 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 HDHD2Q9H0R4 259 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 DNTTIP1Q9H147 329 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 OPA3Q9H6K4 179 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 ARMC7Q9H6L4 198 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 TASP1Q9H6P5 420 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 NIPAL2Q9H841 368 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 PCDH9Q9HC56 1237 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 PRDM11Q9NQV5 511 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 BIN3Q9NQY0 253 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 ABCC13Q9NSE7 274 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 TAS2R3Q9NYW6 316 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 PTTG3PQ9NZH4 202 aa5.4□□□□□ -1.54
CD44-236ENST00000533222 PSMC3IPQ9P2W1 217 aaPredicted RBP5.4□□□□□ -1.54
CD44-236ENST00000533222 MRPS7Q9Y2R9 242 aaKnown RBP5.4□□□□□ -1.54
CD44-236ENST00000533222 SPATA31A3Q5VYP0 1347 aa5.4□□□□□ -1.55
CD44-236ENST00000533222 USP32Q8NFA0 1604 aa5.4□□□□□ -1.55
CD44-236ENST00000533222 MYH2Q9UKX2 1941 aa5.4□□□□□ -1.55
CD44-236ENST00000533222 SHPRHQ149N8 1683 aa5.4□□□□□ -1.55
CD44-236ENST00000533222 COL15A1P39059 1388 aa5.4□□□□□ -1.55
CD44-236ENST00000533222 NID2Q14112 1375 aa5.4□□□□□ -1.55
CD44-236ENST00000533222 ZMYM2Q9UBW7 1377 aa5.4□□□□□ -1.55
CD44-236ENST00000533222 ZNF609O15014 1411 aa5.4□□□□□ -1.55
CD44-236ENST00000533222 MST1RQ04912 1400 aa5.4□□□□□ -1.55
CD44-236ENST00000533222 ABCA8O94911 1581 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 TMEM120BA0PK00 339 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 C12orf71A8MTZ7 269 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 VSTM5A8MXK1 200 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 LEUTXA8MZ59 168 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 KRBOX1C9JBD0 128 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 KBTBD13C9JR72 458 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 E5RI56 91 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 PRR23D1E9PI22 279 aaPredicted RBP5.39□□□□□ -1.55
CD44-236ENST00000533222 F5H0A9 414 aaPredicted RBP5.39□□□□□ -1.55
CD44-236ENST00000533222 H0Y8G0 127 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 H3BSA7 217 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 POLRMTO00411 1230 aaKnown RBP5.39□□□□□ -1.55
CD44-236ENST00000533222 CLDN4O14493 209 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 SCAMP1O15126 338 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 SLC31A2O15432 143 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 AKR7A2O43488 359 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 FOXS1O43638 330 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 JAK2O60674 1132 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 BANF1O75531 89 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 CABYRO75952 493 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 KRT36O76013 467 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 TM7SF2O76062 418 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 ABLIM3O94929 683 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 LARGE1O95461 756 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 DNTTP04053 509 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 PRR23D2P0DMB1 279 aaPredicted RBP5.39□□□□□ -1.55
CD44-236ENST00000533222 MCF2P10911 925 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 MBL2P11226 248 aaPredicted RBP5.39□□□□□ -1.55
CD44-236ENST00000533222 DAOP14920 347 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 CD36P16671 472 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 CTPS1P17812 591 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 HK1P19367 917 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 CMA1P23946 247 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 HOXA9P31269 272 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 ARL1P40616 181 aaPredicted RBP5.39□□□□□ -1.55
CD44-236ENST00000533222 CASRP41180 1078 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 ACTR1BP42025 376 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 SLCO1A2P46721 670 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 CAPZA2P47755 286 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 NEK3P51956 506 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 HUNKP57058 714 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 ACTR1AP61163 376 aa5.39□□□□□ -1.55
CD44-236ENST00000533222 MRPS5P82675 430 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms