RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 ANKS6Q68DC2 871 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 CYB5D1Q6P9G0 228 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 CTAGE6Q86UF2 777 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 CTAGE4Q8IX94 777 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 SIDT2Q8NBJ9 832 aaKnown RBP14.57□□□□□ -0.08
CPSF1-208ENST00000532560 CD200R1Q8TD46 325 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 PYROXD1Q8WU10 500 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 GPR21Q99679 349 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 SLC30A3Q99726 388 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 RAB11FIP5Q9BXF6 653 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 SAYSD1Q9NPB0 183 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 C1GALT1Q9NS00 363 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 ACTR10Q9NZ32 417 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 MOCS1Q9NZB8 636 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 ZFATQ9P243 1243 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 SLC17A6Q9P2U8 582 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 PLAGL1Q9UM63 463 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 RUVBL2Q9Y230 463 aaKnown RBP14.57□□□□□ -0.08
CPSF1-208ENST00000532560 DHRS7Q9Y394 339 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 NFS1Q9Y697 457 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 ZZEF1O43149 2961 aa14.57□□□□□ -0.08
CPSF1-208ENST00000532560 PKD1L2Q7Z442 2459 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 CHD6Q8TD26 2715 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 AHCTF1Q8WYP5 2266 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 ESYT3A0FGR9 886 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 PIPSLA2A3N6 862 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 STMND1H3BQB6 276 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 POLR1CO15160 346 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-208ENST00000532560 AHSGP02765 367 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 CBSLP0DN79 551 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 LIPCP11150 499 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 CD9P21926 228 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 CDH3P22223 829 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 PRDX3P30048 256 aaKnown RBP14.56□□□□□ -0.08
CPSF1-208ENST00000532560 CBSP35520 551 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 BDKRB1P46663 353 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 HSD11B2P80365 405 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 CLN3Q13286 438 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 IL11RAQ14626 422 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 TRADDQ15628 312 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 KLHL38Q2WGJ6 581 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 TEX35Q5T0J7 233 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 UGT3A1Q6NUS8 523 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 TTC23LQ6PF05 361 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 SPESP1Q6UW49 350 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 SLC26A11Q86WA9 606 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 DTX1Q86Y01 620 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 D2HGDHQ8N465 521 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 NOA1Q8NC60 698 aaKnown RBP14.56□□□□□ -0.08
CPSF1-208ENST00000532560 MAGEC3Q8TD91 643 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 INPP5DQ92835 1189 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 RAD51AP1Q96B01 352 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 NAF1Q96HR8 494 aaKnown RBP14.56□□□□□ -0.08
CPSF1-208ENST00000532560 PPM1MQ96MI6 270 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 NDNQ99608 321 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 FAM129AQ9BZQ8 928 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 APMAPQ9HDC9 416 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 NSMCE4AQ9NXX6 385 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 TAS2R13Q9NYV9 303 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 RAB21Q9UL25 225 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 SSUH2Q9Y2M2 353 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 SDK2Q58EX2 2172 aa14.56□□□□□ -0.08
CPSF1-208ENST00000532560 RASGRF2O14827 1237 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 PSIP1O75475 530 aaKnown RBP14.55□□□□□ -0.08
CPSF1-208ENST00000532560 MPC1LP0DKB6 136 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 FGF5P12034 268 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 UGT2B7P16662 529 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 ITPKBP27987 946 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 ARL4DP49703 201 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 TIAL1Q01085 375 aaKnown RBP eCLIP14.55□□□□□ -0.08
CPSF1-208ENST00000532560 GUCY2DQ02846 1103 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 FOXM1Q08050 763 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 TUBB3Q13509 450 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 CUL1Q13616 776 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 KIR2DS3Q14952 304 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 GLE1Q53GS7 698 aaKnown RBP14.55□□□□□ -0.08
CPSF1-208ENST00000532560 RBM20Q5T481 1227 aaKnown RBP14.55□□□□□ -0.08
CPSF1-208ENST00000532560 LRRC8EQ6NSJ5 796 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 ZFAND4Q86XD8 727 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 LRRN4CLQ8ND94 238 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 OR2L8Q8NGY9 312 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 FLVCR1-AS1Q8TAF5 88 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 OR2A14Q96R47 310 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 OR6C1Q96RD1 312 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 CTRCQ99895 268 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 ZDHHC18Q9NUE0 388 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 ZNF446Q9NWS9 450 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 SPHK1Q9NYA1 384 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 SPATA7Q9P0W8 599 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 TRMT6Q9UJA5 497 aaKnown RBP14.55□□□□□ -0.08
CPSF1-208ENST00000532560 TSR3Q9UJK0 312 aaKnown RBP14.55□□□□□ -0.08
CPSF1-208ENST00000532560 SLC39A10Q9ULF5 831 aa14.55□□□□□ -0.08
CPSF1-208ENST00000532560 ARHGEF33A8MVX0 844 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 KLK10O43240 276 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 GSTA2P09210 222 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 MSL3P1P0C860 447 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 EBLN1P0CF75 366 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 FOLR1P15328 257 aa14.54□□□□□ -0.08
CPSF1-208ENST00000532560 PEBP1P30086 187 aaKnown RBP14.54□□□□□ -0.08
CPSF1-208ENST00000532560 SKIV2L2P42285 1042 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms