RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CDKL1Q00532 357 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 IL9RQ01113 521 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 CSHL1Q14406 222 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 SEPT7Q16181 437 aaKnown RBP12.18□□□□□ -0.46
COPB1-208ENST00000532088 C4orf17Q53FE4 359 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 CDKL4Q5MAI5 379 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.18□□□□□ -0.46
COPB1-208ENST00000532088 TTC23LQ6PF05 361 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 PIWIL4Q7Z3Z4 852 aaKnown RBP12.18□□□□□ -0.46
COPB1-208ENST00000532088 GATAD2AQ86YP4 633 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 DCUN1D3Q8IWE4 304 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 STAG3L4Q8TBR4 150 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 CXorf40BQ96DE9 158 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.18□□□□□ -0.46
COPB1-208ENST00000532088 KIR3DX1Q9H7L2 352 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 ZNF624Q9P2J8 865 aaPredicted RBP12.18□□□□□ -0.46
COPB1-208ENST00000532088 CPNE7Q9UBL6 633 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 FAM8A1Q9UBU6 413 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 PSMD13Q9UNM6 376 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 ASF1AQ9Y294 204 aa12.18□□□□□ -0.46
COPB1-208ENST00000532088 MYO15AQ9UKN7 3530 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 B4DGG1 531 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 MYO1CO00159 1063 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 BTN3A1O00481 513 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 TRIM38O00635 465 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 NUDT21O43809 227 aaKnown RBP12.17□□□□□ -0.46
COPB1-208ENST00000532088 C1orf105O95561 183 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 VIPP01282 170 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 CD59P13987 128 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 KRT4P19013 534 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 HSD17B2P37059 387 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 DUSP3P51452 185 aaPredicted RBP12.17□□□□□ -0.46
COPB1-208ENST00000532088 PGGT1BP53609 377 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 DLG1Q12959 904 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 ABRQ12979 859 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 NR1D2Q14995 579 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 NR0B2Q15466 257 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 PPM1JQ5JR12 505 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 SBSNQ6UWP8 590 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 ZNF438Q7Z4V0 828 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 ISCA2Q86U28 154 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 TRIM48Q8IWZ4 208 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 ARL14Q8N4G2 192 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 GOLGA6L1Q8N7Z2 621 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 BANPQ8N9N5 519 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 OR2I1PQ8NGU4 316 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 MCOLN3Q8TDD5 553 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 SLC37A2Q8TED4 501 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 KCTD4Q8WVF5 259 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 SKA2Q8WVK7 121 aaPredicted RBP12.17□□□□□ -0.46
COPB1-208ENST00000532088 RAD51AP1Q96B01 352 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 TLCD1Q96CP7 247 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 GPR78Q96P69 363 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 SMC6Q96SB8 1091 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 RAB11FIP5Q9BXF6 653 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 TRIM54Q9BYV2 358 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 CAAP1Q9H8G2 361 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 PARVBQ9HBI1 364 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 SLC40A1Q9NP59 571 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 IMP3Q9NV31 184 aaKnown RBP12.17□□□□□ -0.46
COPB1-208ENST00000532088 PCMTD2Q9NV79 361 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 SPATA7Q9P0W8 599 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 GRID1Q9ULK0 1009 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 TMCO1Q9UM00 188 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 OARD1Q9Y530 152 aa12.17□□□□□ -0.46
COPB1-208ENST00000532088 TDRD6O60522 2096 aaKnown RBP12.16□□□□□ -0.46
COPB1-208ENST00000532088 LILRA5A6NI73 299 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 OR52A4PA6NMU1 304 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 ZNF839A8K0R7 811 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 SYCE1LA8MT33 242 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 COPEO14579 308 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 FFAR2O15552 330 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 ZW10O43264 779 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 SIGLEC6O43699 453 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 KERAO60938 352 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 HIST1H2AGP0C0S8 130 aaPredicted RBP12.16□□□□□ -0.46
COPB1-208ENST00000532088 ERGP11308 486 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 CKMT1AP12532 417 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 GLB1P16278 677 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 HIST1H2ADP20671 130 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 MAP4P27816 1152 aaKnown RBP12.16□□□□□ -0.46
COPB1-208ENST00000532088 GPR3P46089 330 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 SLC18A1P54219 525 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 IRF9Q00978 393 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 HHEXQ03014 270 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 ARHGAP19Q14CB8 494 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 PPP1R3AQ16821 1122 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 CCDC153Q494R4 210 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 TECRLQ5HYJ1 363 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 UBE2R2Q712K3 238 aaPredicted RBP12.16□□□□□ -0.46
COPB1-208ENST00000532088 EXOC3L1Q86VI1 746 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 SLC35F3Q8IY50 421 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 SRRM1Q8IYB3 904 aaKnown RBP12.16□□□□□ -0.46
COPB1-208ENST00000532088 PLD6Q8N2A8 252 aaKnown RBP12.16□□□□□ -0.46
COPB1-208ENST00000532088 RAB42Q8N4Z0 105 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 KYQ8NBH2 561 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 BAHD1Q8TBE0 780 aaPredicted RBP12.16□□□□□ -0.46
COPB1-208ENST00000532088 NAT6Q93015 286 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 NXNL1Q96CM4 212 aa12.16□□□□□ -0.46
COPB1-208ENST00000532088 APOPT1Q96IL0 206 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms