RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 A0A1W2PNU3 283 aaPredicted RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 LNP1A1A4G5 178 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 HEPACAM2A8MVW5 462 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 IPO8O15397 1037 aaKnown RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 TSPAN1O60635 241 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 MAGEC1O60732 1142 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 PTP4A3O75365 173 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 CREG1O75629 220 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 UGT1A4P22310 534 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 CA6P23280 308 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 GCH1P30793 250 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 TLX1P31314 330 aaPredicted RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 PSMB10P40306 273 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 RPL21P46778 160 aaKnown RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 SIRPAP78324 504 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 COX10Q12887 443 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 IRF3Q14653 427 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 IGSF11Q5DX21 431 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 DHRS7BQ6IAN0 325 aaPredicted RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 FIGLAQ6QHK4 219 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 C4orf50Q6ZRC1 276 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 TMPRSS11FQ6ZWK6 438 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 LDB1Q86U70 411 aaPredicted RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 CDC20BQ86Y33 519 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 KIRREL3Q8IZU9 778 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 LSMEM2Q8N112 164 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 VANGL1Q8TAA9 524 aaPredicted RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 ZNF519Q8TB69 540 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 SMAP2Q8WU79 429 aaPredicted RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 CCDC107Q8WV48 283 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 NSMCE3Q96MG7 304 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 GPATCH1Q9BRR8 931 aaKnown RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 LMF2Q9BU23 707 aaKnown RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 PITPNM3Q9BZ71 974 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 SPATC1LQ9H0A9 340 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 PPANQ9NQ55 473 aaKnown RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 SPHK2Q9NRA0 654 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 HAUS2Q9NVX0 235 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 FAM120CQ9NX05 1096 aaKnown RBP2.75□□□□□ -1.97
ATM-217ENST00000531957 STK26Q9P289 416 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 TUBE1Q9UJT0 475 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.75□□□□□ -1.97
ATM-217ENST00000531957 PLAGL1Q9UM63 463 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 PPP1R3CQ9UQK1 317 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 PPP2R2CQ9Y2T4 447 aa2.75□□□□□ -1.97
ATM-217ENST00000531957 ASTN2O75129 1339 aaPredicted RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 MEIS2O14770 477 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 AVILO75366 819 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 BAIAP3O94812 1187 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 SLC6A6P31641 620 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 LEPRP48357 1165 aaKnown RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 NAP1L1P55209 391 aaKnown RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 PAX9P55771 341 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 GSDMDP57764 484 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 KRTAP10-8P60410 259 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 HERV-K104P61576 105 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 CDK3Q00526 305 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 MS4A2Q01362 244 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 MC1RQ01726 317 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 RAPSNQ13702 412 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 NR1D2Q14995 579 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 XKR3Q5GH77 459 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 ELFN2Q5R3F8 820 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 WLSQ5T9L3 541 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 FIP1L1Q6UN15 594 aaKnown RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 BTN2A1Q7KYR7 527 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 TBC1D1Q86TI0 1168 aaPredicted RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 TMEM173Q86WV6 379 aaPredicted RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 CEP57L1Q8IYX8 460 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 ARHGAP24Q8N264 748 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 Q8N377 158 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 PAPD5Q8NDF8 572 aaKnown RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 GPRC5AQ8NFJ5 357 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 IRGQQ8WZA9 623 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 LRRC59Q96AG4 307 aaKnown RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 ZNF486Q96H40 463 aaPredicted RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 FOXN4Q96NZ1 517 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 USP28Q96RU2 1077 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 CDRT15Q96T59 188 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 SOSTQ9BQB4 213 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 KIFC3Q9BVG8 833 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 MIS12Q9H081 205 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 OSGEPL1Q9H4B0 414 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 THEGQ9P2T0 379 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 SEC63Q9UGP8 760 aaKnown RBP2.74□□□□□ -1.97
ATM-217ENST00000531957 DAPK2Q9UIK4 370 aa2.74□□□□□ -1.97
ATM-217ENST00000531957 ZNF644Q9H582 1327 aaPredicted RBP2.73□□□□□ -1.97
ATM-217ENST00000531957 A0A1W2PQ09 198 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 KPNA7A9QM74 516 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 DFFBO76075 338 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 BCL10O95999 233 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 IGHV4-31P0DP07 118 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 CYP2A7P20853 494 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 SAT1P21673 171 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 NRIP1P48552 1158 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 SLC9A3P48764 834 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 ITPRIPL2Q3MIP1 535 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 RAB41Q5JT25 222 aa2.73□□□□□ -1.97
ATM-217ENST00000531957 RTN4RL2Q86UN3 420 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms