RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 PROKR1Q8TCW9 393 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 ASZ1Q8WWH4 475 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 PLAGL1Q9UM63 463 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 SRPK3Q9UPE1 567 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 ZSCAN9O15535 394 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-204ENST00000530395 CEACAM4O75871 244 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 APOA4P06727 396 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 CD63P08962 238 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 RAB28P51157 221 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 HSPA14Q0VDF9 509 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 TMED2Q15363 201 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 ZIC1Q15915 447 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 ZNF385CQ66K41 422 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-204ENST00000530395 RHBDD2Q6NTF9 364 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 ZNF534Q76KX8 674 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 HPS6Q86YV9 775 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 FAM26EQ8N5C1 309 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 ZBTB2Q8N680 514 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 FLVCR1-AS1Q8TAF5 88 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 SGSM3Q96HU1 749 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 ZNF778Q96MU6 729 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 IP6K3Q96PC2 410 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 CARD6Q9BX69 1037 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 AP1M1Q9BXS5 423 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 CATSPERZQ9NTU4 200 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 TXLNGQ9NUQ3 528 aa20.16■□□□□ 0.82
SMPD1-204ENST00000530395 USP9YO00507 2555 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-204ENST00000530395 CLEC18AA5D8T8 446 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 DPM1O60762 260 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 VPS4BO75351 444 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 TPBGLP0DKB5 382 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 ETS1P14921 441 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 OTX2P32243 289 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 CCR7P32248 378 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 TTPAP49638 278 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 ATP1A4Q13733 1029 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 RPS6KA1Q15418 735 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 NADK2Q4G0N4 442 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 C1orf189Q5VU69 101 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 MLIPQ5VWP3 458 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 TLDC1Q6P9B6 456 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 CLEC18BQ6UXF7 455 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 UNC5DQ6UXZ4 953 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 DCUN1D3Q8IWE4 304 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 CLEC18CQ8NCF0 446 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 CPT1CQ8TCG5 803 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 SPRTNQ9H040 489 aaPredicted RBP20.15■□□□□ 0.82
SMPD1-204ENST00000530395 NDOR1Q9UHB4 597 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 VPS4AQ9UN37 437 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 PLCL2Q9UPR0 1127 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 CCDC88CQ9P219 2028 aa20.15■□□□□ 0.82
SMPD1-204ENST00000530395 ZNF185O15231 689 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 CBSLP0DN79 551 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 PKLRP30613 574 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 CBSP35520 551 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 FOLR3P41439 243 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 GABRA4P48169 554 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 DCDP81605 110 aaKnown RBP20.14■□□□□ 0.81
SMPD1-204ENST00000530395 SEMA3AQ14563 771 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 PCID2Q5JVF3 399 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 C4orf22Q6V702 233 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 PRUNE1Q86TP1 453 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 ZNF655Q8N720 491 aaPredicted RBP20.14■□□□□ 0.81
SMPD1-204ENST00000530395 GLIS1Q8NBF1 620 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 FDCSPQ8NFU4 85 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 CFAP61Q8NHU2 1237 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 GSDMBQ8TAX9 411 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 SLC22A18Q96BI1 424 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 NDC1Q9BTX1 674 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 EIF2B3Q9NR50 452 aaKnown RBP20.14■□□□□ 0.81
SMPD1-204ENST00000530395 GPR83Q9NYM4 423 aa20.14■□□□□ 0.81
SMPD1-204ENST00000530395 IFT80Q9P2H3 777 aaPredicted RBP20.14■□□□□ 0.81
SMPD1-204ENST00000530395 UTP20O75691 2785 aaKnown RBP20.14■□□□□ 0.81
SMPD1-204ENST00000530395 SPTAN1Q13813 2472 aaKnown RBP20.13■□□□□ 0.81
SMPD1-204ENST00000530395 A6NL46 340 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 CYSRT1A8MQ03 144 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 H3BMH7 237 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 AP3B1O00203 1094 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 PRMT5O14744 637 aaPredicted RBP20.13■□□□□ 0.81
SMPD1-204ENST00000530395 HCRTR1O43613 425 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 GPC4O75487 556 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 IGHEP01854 428 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 PEBP1P30086 187 aaKnown RBP20.13■□□□□ 0.81
SMPD1-204ENST00000530395 SRSF1Q07955 248 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMPD1-204ENST00000530395 CCNG2Q16589 344 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 KYNUQ16719 465 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 MEI1Q5TIA1 1274 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 PTRHD1Q6GMV3 140 aaKnown RBP20.13■□□□□ 0.81
SMPD1-204ENST00000530395 MRGPREQ86SM8 312 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 DNAJC22Q8N4W6 341 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 GALNT11Q8NCW6 608 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 GBP5Q96PP8 586 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 PANX3Q96QZ0 392 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 INTS7Q9NVH2 962 aaKnown RBP20.13■□□□□ 0.81
SMPD1-204ENST00000530395 GNPTGQ9UJJ9 305 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 CDYLQ9Y232 598 aa20.13■□□□□ 0.81
SMPD1-204ENST00000530395 PTRH2Q9Y3E5 179 aaKnown RBP20.13■□□□□ 0.81
SMPD1-204ENST00000530395 PEX12O00623 359 aa20.12■□□□□ 0.81
SMPD1-204ENST00000530395 CD3EAPO15446 510 aaKnown RBP20.12■□□□□ 0.81
SMPD1-204ENST00000530395 KLF7O75840 302 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms