RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 FGF3P11487 239 aaPredicted RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 ATP5F1P24539 256 aaPredicted RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 HOXD12P35452 270 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 SLC19A1P41440 591 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 SPEM2Q0P670 501 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 SF3A3Q12874 501 aaKnown RBP eCLIP10.35□□□□□ -0.75
SOX6-213ENST00000530378 PLCL1Q15111 1095 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 ZXDCQ2QGD7 858 aaPredicted RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 LAIR1Q6GTX8 287 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 SLC23A3Q6PIS1 610 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 CEP76Q8TAP6 659 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 RDH11Q8TC12 318 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 TMEM79Q9BSE2 394 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 NUSAP1Q9BXS6 441 aaKnown RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 TRIM54Q9BYV2 358 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 RABEP2Q9H5N1 569 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 OGFRQ9NZT2 677 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 STOX2Q9P2F5 926 aaPredicted RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 A0A1B0GTQ1 180 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 LNP1A1A4G5 178 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 LMO7DNF2Z398 122 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 KHNYNO15037 678 aaKnown RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 SLC16A5O15375 505 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 CCNT2O60583 730 aaKnown RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 IPO13O94829 963 aaKnown RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 VIPP01282 170 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 IMPA1P29218 277 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 MDH1P40925 334 aaKnown RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 PPM1FP49593 454 aaPredicted RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 SLC18A1P54219 525 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 NAGLUP54802 743 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 CDH13P55290 713 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 FASTKQ14296 549 aaKnown RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 GRB7Q14451 532 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 ZNF423Q2M1K9 1284 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 LIPMQ5VYY2 423 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 IYDQ6PHW0 289 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 SUSD1Q6UWL2 747 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 ABRAXAS1Q6UWZ7 409 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 FAM47EQ6ZV65 393 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 RABEPKQ7Z6M1 372 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 RASGRP3Q8IV61 690 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 SYTL1Q8IYJ3 562 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 MINDY1Q8N5J2 469 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 DCBLD1Q8N8Z6 715 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 SUMF1Q8NBK3 374 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 PDPRQ8NCN5 879 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 OR52E1Q8NGJ3 308 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 AGR3Q8TD06 166 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 RHBDF1Q96CC6 855 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 CAMK1GQ96NX5 476 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 GATA5Q9BWX5 397 aaPredicted RBP10.35□□□□□ -0.75
SOX6-213ENST00000530378 ERVMER34-1Q9H9K5 563 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 CPNE7Q9UBL6 633 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 MID2Q9UJV3 735 aa10.35□□□□□ -0.75
SOX6-213ENST00000530378 MYO1CO00159 1063 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 SUPT7LO94864 414 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 RPN2P04844 631 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 ANXA5P08758 320 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 ENO2P09104 434 aaPredicted RBP10.34□□□□□ -0.75
SOX6-213ENST00000530378 ARRB2P32121 409 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 ARL1P40616 181 aaPredicted RBP10.34□□□□□ -0.75
SOX6-213ENST00000530378 MAPK9P45984 424 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 CCT8P50990 548 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 ATXN3P54252 364 aaPredicted RBP10.34□□□□□ -0.75
SOX6-213ENST00000530378 TBPL1P62380 186 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 GNGT1P63211 74 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 BIRC2Q13490 618 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 NAE1Q13564 534 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 GPR18Q14330 331 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 SETDB1Q15047 1291 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 TTC23LQ6PF05 361 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 AGTRAPQ6RW13 159 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 RAB44Q7Z6P3 723 aaPredicted RBP10.34□□□□□ -0.75
SOX6-213ENST00000530378 TBC1D21Q8IYX1 336 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 OR9A1PQ8NGU1 263 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 MAPK15Q8TD08 544 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 LRRC8CQ8TDW0 803 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 ZNF480Q8WV37 535 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 LOXL4Q96JB6 756 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 ACAT2Q9BWD1 397 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 PITPNM3Q9BZ71 974 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 SEMA4BQ9NPR2 832 aaPredicted RBP10.34□□□□□ -0.75
SOX6-213ENST00000530378 RXFP3Q9NSD7 469 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 PCOLCE2Q9UKZ9 415 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 ICKQ9UPZ9 632 aa10.34□□□□□ -0.75
SOX6-213ENST00000530378 TRIM38O00635 465 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 PPP6CO00743 305 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 CASC3O15234 703 aaKnown RBP10.33□□□□□ -0.76
SOX6-213ENST00000530378 BIRC5O15392 142 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 ITM2AO43736 263 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 NOBOXO60393 691 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 TRIM13O60858 407 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 WDR47O94967 919 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 CER1O95813 267 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 CHRNGP07510 517 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 SYPP08247 313 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 PSMB5P28074 263 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 DPP6P42658 865 aa10.33□□□□□ -0.76
SOX6-213ENST00000530378 PRKAA2P54646 552 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms