RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	CYP8B1	Q9UNU6	501 aa		14.27	□□□□□ -0.12
NR1H3-231	ENST00000529540	MYLK	Q15746	1914 aa		14.27	□□□□□ -0.13
NR1H3-231	ENST00000529540		A0A087WXM4	84 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	PRORSD1P	A6NEY8	169 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	IGLON5	A6NGN9	336 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	AGAP14	A8MT82	685 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	MRAS	O14807	208 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	UBD	O15205	165 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ZSCAN9	O15535	394 aa	Predicted RBP	14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TCN1	P20061	433 aa	Predicted RBP	14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ACSL1	P33121	698 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ACADVL	P49748	655 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	POU4F1	Q01851	419 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TYSND1	Q2T9J0	566 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TECRL	Q5HYJ1	363 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	INTS11	Q5TA45	600 aa	Known RBP	14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ZNF554	Q86TJ5	538 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	CEP97	Q8IW35	865 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	C2CD4A	Q8NCU7	369 aa	Predicted RBP	14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	CADM4	Q8NFZ8	388 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	FAM174A	Q8TBP5	190 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TFAP2C	Q92754	450 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TMIGD2	Q96BF3	282 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TOE1	Q96GM8	510 aa	Known RBP	14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	SLC29A1	Q99808	456 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	PCDHAC1	Q9H158	963 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	CAAP1	Q9H8G2	361 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	C8orf4	Q9NR00	106 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	CRLS1	Q9UJA2	301 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ZNF106	Q9H2Y7	1883 aa	Known RBP	14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	IGHV1OR15-9	A0A0B4J2B8	117 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TRBV5-4	A0A0C4DH59	114 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	DYTN	A2CJ06	578 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	BBIP1	A8MTZ0	92 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TNFRSF10A	O00220	468 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TOR1B	O14657	336 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	STAMBP	O95630	424 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	MYF6	P23409	242 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	CD151	P48509	253 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	NUBP1	P53384	320 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	RAB15	P59190	212 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	MPP1	Q00013	466 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	PTPRCAP	Q14761	206 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ZBED5	Q49AG3	693 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	AGK	Q53H12	422 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540		Q6ZNX1	250 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ROPN1L	Q96C74	230 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	TPSD1	Q9BZJ3	242 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ZCCHC2	Q9C0B9	1178 aa	Known RBP	14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ABCG8	Q9H221	673 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	SEMA6A	Q9H2E6	1030 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	IGSF5	Q9NSI5	407 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	FBXO5	Q9UKT4	447 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	ZFR2	Q9UPR6	939 aa	Known RBP	14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	FNDC3A	Q9Y2H6	1198 aa	Known RBP	14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540	SNX13	Q9Y5W8	968 aa		14.26	□□□□□ -0.13
NR1H3-231	ENST00000529540		A0A0U1RQS6	177 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	SH3PXD2B	A1X283	911 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	GOLGA8CP	A6NN73	597 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	CFAP99	D6REC4	459 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	GOLGA8T	H3BQL2	631 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	LAT	O43561	262 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	NRP2	O60462	931 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	NDUFS3	O75489	264 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	SAT1	P21673	171 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	GPR1	P46091	355 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	LEPR	P48357	1165 aa	Known RBP	14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	CHRNA6	Q15825	494 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	LDLRAP1	Q5SW96	308 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	KIAA0895L	Q68EN5	471 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	PRMT9	Q6P2P2	845 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	KLHL35	Q6PF15	583 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	TAS2R42	Q7RTR8	314 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	WDR5B	Q86VZ2	330 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	PHYKPL	Q8IUZ5	450 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	MYO1H	Q8N1T3	1032 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	DTWD2	Q8NBA8	298 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	FOXJ1	Q92949	421 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	ELMO2	Q96JJ3	720 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	RIOK2	Q9BVS4	552 aa	Known RBP	14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	TRIM15	Q9C019	465 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	FAIM	Q9NVQ4	179 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	RHBDL2	Q9NX52	303 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	CD84	Q9UIB8	345 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	COMMD10	Q9Y6G5	202 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	TECTA	O75443	2155 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	SCN8A	Q9UQD0	1980 aa		14.25	□□□□□ -0.13
NR1H3-231	ENST00000529540	PRR23A	A6NEV1	266 aa		14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	AQP12B	A6NM10	295 aa		14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	QSOX1	O00391	747 aa		14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	PLOD2	O00469	737 aa		14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	CCL22	O00626	93 aa		14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	GAPDHS	O14556	408 aa	Predicted RBP	14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	ZNF7	P17097	686 aa	Predicted RBP	14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	HNRNPA2B1	P22626	353 aa	Known RBP	14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	ACRV1	P26436	265 aa		14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	AKT2	P31751	481 aa		14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	SLC1A2	P43004	574 aa		14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	PTGER3	P43115	390 aa		14.24	□□□□□ -0.13
NR1H3-231	ENST00000529540	NME5	P56597	212 aa		14.24	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms