RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 EFHC1Q5JVL4 640 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 PLPP4Q5VZY2 271 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 TWF2Q6IBS0 349 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 KLHL24Q6TFL4 600 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 LCTLQ6UWM7 567 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 CATSPER4Q7RTX7 472 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 TDRPQ86YL5 185 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 ARHGAP12Q8IWW6 846 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 ZCCHC9Q8N567 271 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 ZBTB2Q8N680 514 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 SCCPDHQ8NBX0 429 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 URGCPQ8TCY9 931 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 KCNG4Q8TDN1 519 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 FAM216AQ8WUB2 273 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 PRPF31Q8WWY3 499 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 GTF3C6Q969F1 213 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 CEP170P1Q96L14 293 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 SLC25A33Q9BSK2 321 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 MMTAG2Q9BU76 263 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 C1QTNF5Q9BXJ0 243 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 POMKQ9H5K3 350 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 BPIFA1Q9NP55 256 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 MRPL17Q9NRX2 175 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 ANKEF1Q9NU02 776 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 SELENONQ9NZV5 590 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 EPS15L1Q9UBC2 864 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 WNT16Q9UBV4 365 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 NAP1L2Q9ULW6 460 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 PIN4Q9Y237 131 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 KCNE2Q9Y6J6 123 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 ZFP37Q9Y6Q3 630 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 EVPLQ92817 2033 aa4.71□□□□□ -1.66
CSDE1-212ENST00000529046 MYH9P35579 1960 aaKnown RBP4.71□□□□□ -1.66
CSDE1-212ENST00000529046 LOXHD1Q8IVV2 1947 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 IGLV5-52A0A0A0MRZ9 124 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 FAM237AA0A1B0GTK4 181 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 A0A1B0GUA9 196 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 C4orf47A7E2U8 309 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 C2CD4DB7Z1M9 353 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 BCAT2O15382 392 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 CHMP2AO43633 222 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 SLC37A4O43826 429 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 CSDE1O75534 798 aaKnown RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 GAGE7O76087 117 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 MTA2O94776 668 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 DDHD2O94830 711 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 EIF2S1P05198 315 aaKnown RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 GAGE12FP0CL80 117 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 GAGE12GP0CL81 117 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 GAGE12IP0CL82 117 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 ARL2P36404 184 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 PBX3P40426 434 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 SLC11A1P49279 550 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 ECT2LQ008S8 904 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 GAGE1Q13065 139 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 GAGE4Q13068 117 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 ORC2Q13416 577 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 TFDP1Q14186 410 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 LETM2Q2VYF4 491 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 DPCR1Q3MIW9 517 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 HIST2H2BCQ6DN03 193 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 HIST2H2BDQ6DRA6 164 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 NOTUMQ6P988 496 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 CYP20A1Q6UW02 462 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 SHFQ7M4L6 423 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 TRMT1LQ7Z2T5 733 aaKnown RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 TMEM173Q86WV6 379 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 FOXRED2Q8IWF2 684 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 HACE1Q8IYU2 909 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 IQCF1Q8N6M8 205 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 TDRD5Q8NAT2 981 aaKnown RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 RNF149Q8NC42 400 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 KLHL5Q96PQ7 755 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 MTMR9Q96QG7 549 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 RTP3Q9BQQ7 232 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 LXNQ9BS40 222 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 HAUS8Q9BT25 410 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 PDZD7Q9H5P4 517 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 FBRSL1Q9HCM7 1045 aaKnown RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 MMP25Q9NPA2 562 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 PDRG1Q9NUG6 133 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 BLOC1S4Q9NUP1 217 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 CISD1Q9NZ45 108 aaKnown RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 WRAP73Q9P2S5 460 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 DNAJB4Q9UDY4 337 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 MYO6Q9UM54 1294 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 PROCRQ9UNN8 238 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 AAR2Q9Y312 384 aaKnown RBP4.7□□□□□ -1.66
CSDE1-212ENST00000529046 CEPT1Q9Y6K0 416 aa4.7□□□□□ -1.66
CSDE1-212ENST00000529046 TMEM150BA6NC51 233 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 ARL5CA6NH57 179 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 A8MZ25 164 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 SCAMP1O15126 338 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 TEX28O15482 410 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 TSPAN1O60635 241 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 PTP4A3O75365 173 aa4.69□□□□□ -1.66
CSDE1-212ENST00000529046 ERLIN2O94905 339 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms