RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 DLG3Q92796 817 aa12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 TAAR6Q96RI8 345 aa12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 SPSB2Q99619 263 aa12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 FICDQ9BVA6 458 aa12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 TRIM8Q9BZR9 551 aa12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 SOX17Q9H6I2 414 aaPredicted RBP12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 WDR54Q9H977 334 aa12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 VPS37BQ9H9H4 285 aa12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 MRM3Q9HC36 420 aaKnown RBP12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 RSPH14Q9UHP6 348 aa12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 NENFQ9UMX5 172 aa12.5□□□□□ -0.41
CLNS1A-207ENST00000527133 A0A1B0GX78 115 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 AGAP14A8MT82 685 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 SMTNL1A8MU46 457 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 CCL21O00585 134 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 KLHL18O94889 574 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 TNNT1P13805 278 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 ITGALP20701 1170 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 ARG2P78540 354 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 ZBED6P86452 979 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 RPA4Q13156 261 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 TMEM207Q6UWW9 146 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 MFSD7Q6UXD7 560 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 COX15Q7KZN9 410 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 BZW1Q7L1Q6 419 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 FAM20CQ8IXL6 584 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 ZNF808Q8N4W9 903 aaPredicted RBP12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 OR11G2Q8NGC1 345 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 OR13C4Q8NGS5 318 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 HEXDCQ8WVB3 486 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 LMF1Q96S06 567 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 APOL2Q9BQE5 337 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 MESP1Q9BRJ9 268 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 EURLQ9NYK6 297 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 CTSFQ9UBX1 484 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 SH3BGRL2Q9UJC5 107 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 PLAGL1Q9UM63 463 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 ASF1AQ9Y294 204 aa12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 TDRKHQ9Y2W6 561 aaKnown RBP12.49□□□□□ -0.41
CLNS1A-207ENST00000527133 C5orf60A6NFR6 353 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 ISM1B1AKI9 464 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 CCL22O00626 93 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 CST8O60676 142 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 UNC5CO95185 931 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 ALBP02768 609 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 PIM1P11309 404 aaPredicted RBP12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 GCGRP47871 477 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 OLIG2Q13516 323 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 SLC5A12Q1EHB4 618 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 KAZNQ674X7 775 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 RPTNQ6XPR3 784 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 MICALCLQ6ZW33 695 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 SNX20Q7Z614 316 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 CLDN19Q8N6F1 224 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 METTL27Q8N6F8 245 aaPredicted RBP12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 BPIFA3Q9BQP9 254 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 ZNF160Q9HCG1 818 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 ZDHHC3Q9NYG2 299 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 PLA2G3Q9NZ20 509 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 OR6C2Q9NZP2 312 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 KLHL20Q9Y2M5 609 aa12.48□□□□□ -0.41
CLNS1A-207ENST00000527133 SNRNP200O75643 2136 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 PCNX1Q96RV3 2341 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 DYTNA2CJ06 578 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 TPBGLP0DKB5 382 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 MAGP20916 626 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 PEBP1P30086 187 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 CDKN2BP42772 138 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 CDKN1CP49918 316 aaPredicted RBP12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 ARSFP54793 590 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 FANCCQ00597 558 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 SRSF11Q05519 484 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 TFDP2Q14188 446 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 BRD3Q15059 726 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 KRTAP21-3Q3LHN1 58 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 MTFR2Q6P444 385 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 MCATQ8IVS2 390 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 ZNF295-AS1Q8N0V1 137 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 SLC35G2Q8TBE7 412 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 P3H4Q92791 437 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 HAUS1Q96CS2 278 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 VPS50Q96JG6 964 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 VAT1Q99536 393 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 GORASP1Q9BQQ3 440 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 CRB3Q9BUF7 120 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 SLC26A1Q9H2B4 701 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 SEMA3GQ9NS98 782 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 CUTCQ9NTM9 273 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 NXT1Q9UKK6 140 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 TRHDEQ9UKU6 1024 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 CAPN11Q9UMQ6 739 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 HYOU1Q9Y4L1 999 aa12.47□□□□□ -0.41
CLNS1A-207ENST00000527133 IGLV3-16A0A075B6K0 115 aa12.46□□□□□ -0.41
CLNS1A-207ENST00000527133 TRAV17A0A0B4J275 112 aa12.46□□□□□ -0.41
CLNS1A-207ENST00000527133 DSCR3O14972 297 aa12.46□□□□□ -0.41
CLNS1A-207ENST00000527133 ANXA9O76027 345 aa12.46□□□□□ -0.41
CLNS1A-207ENST00000527133 CRTAMO95727 393 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms