RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ZNF263O14978 683 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 PAEPP09466 180 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3HP0C7X1 549 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 VDRP11473 427 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 FCGR1AP12314 374 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 KRT5P13647 590 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 IL9P15248 144 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 FOSL2P15408 326 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CYP11B1P15538 503 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 NPPBP16860 134 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 HMGA1P17096 107 aaKnown RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 GJA1P17302 382 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TRIM21P19474 475 aaKnown RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 PAX3P23760 479 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 HNRNPH3P31942 346 aaKnown RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TNFSF8P32971 234 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CDH5P33151 784 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 KRT9P35527 623 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 USP8P40818 1118 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 PRKCIP41743 596 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 GPD2P43304 727 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 RPL34P49207 117 aaKnown RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 COMPP49747 757 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 RGS7P49802 495 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 MFAP3P55082 362 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 MAP3K7CLP57077 242 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TPM4P67936 248 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 PITX1P78337 314 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TSPY1Q01534 308 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CDR2Q01850 454 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TWF1Q12792 350 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CETN1Q12798 172 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 MTF1Q14872 753 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 MEA1Q16626 185 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 GOLGA7BQ2TAP0 167 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 ASTE1Q2TB18 679 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 PTPN20Q4JDL3 420 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 FILIP1LQ4L180 1135 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 RAB6CQ53S08 254 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 ARL13AQ5H913 290 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 FSCBQ5H9T9 825 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 RAB41Q5JT25 222 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 RARS2Q5T160 578 aaKnown RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 VWA5B1Q5TIE3 1220 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TAF3Q5VWG9 929 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TPGS2Q68CL5 300 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 ARHGAP17Q68EM7 881 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SPECC1LQ69YQ0 1117 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3GQ6DHY5 549 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3CQ6IPX1 549 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TRNP1Q6NT89 227 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 ANKRD54Q6NXT1 300 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 LCLAT1Q6UWP7 414 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 PRSS57Q6UWY2 283 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CREB3L2Q70SY1 520 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 ENOSF1Q7L5Y1 443 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 PIGZQ86VD9 579 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CCDC25Q86WR0 208 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 METTL23Q86XA0 190 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 FMNL3Q8IVF7 1028 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3Q8IZP1 549 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 THEM5Q8N1Q8 247 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 OR2C3Q8N628 320 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SPC24Q8NBT2 197 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 C1orf131Q8NDD1 294 aaKnown RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 ANKRD20A12PQ8NF67 263 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SCAMP5Q8TAC9 235 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SPPL2BQ8TCT7 592 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 WFIKKN2Q8TEU8 576 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SLC35F5Q8WV83 523 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 ADAMTS14Q8WXS8 1223 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SECISBP2LQ93073 1101 aaKnown RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 WBP2Q969T9 261 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 PSMG2Q969U7 264 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 JAKMIP2Q96AA8 810 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 PABPC5Q96DU9 382 aaKnown RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SLITRK1Q96PX8 696 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SLC22A12Q96S37 553 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CPXM1Q96SM3 734 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SEPT5Q99719 369 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 DUSP16Q9BY84 665 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 RAB6CQ9H0N0 254 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 SNX25Q9H3E2 840 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 KLHL31Q9H511 634 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 HAUS4Q9H6D7 363 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CCDC134Q9H6E4 229 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 NMUR1Q9HB89 426 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 OSER1Q9NX31 292 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 AIPL1Q9NZN9 384 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CHORDC1Q9UHD1 332 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 FBXO4Q9UKT5 387 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 RAB21Q9UL25 225 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 MAGED2Q9UNF1 606 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TFR2Q9UP52 801 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CEP83Q9Y592 693 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 KALRNO60229 2985 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TP53BP1Q12888 1972 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 CEP192Q8TEP8 1941 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 KMT2EQ8IZD2 1858 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms