RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 AP1G1O43747 822 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 SNX2O60749 519 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 NIPSNAP2O75323 286 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 ESRRBO95718 433 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 CHEK2O96017 543 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 SLC4A1P02730 911 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 FTH1P02794 183 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 S100BP04271 92 aaPredicted RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 ENO1P06733 434 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 C8GP07360 202 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 CHRNGP07510 517 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 C1SP09871 688 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 KITP10721 976 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 UROSP10746 265 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 ADRB3P13945 408 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 GFAPP14136 432 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 CTPS1P17812 591 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 VCLP18206 1134 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 SPINK2P20155 84 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 CHRM3P20309 590 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 MSH3P20585 1137 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 MPSTP25325 297 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 TEAD1P28347 426 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 GGT5P36269 586 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 HNMTP50135 292 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 CCR5P51681 352 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 AP1S2P56377 157 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 C21orf59P57076 290 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 CLDN2P57739 230 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 BTKQ06187 659 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 SFSWAPQ12872 951 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 FGL2Q14314 439 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 PTPRCAPQ14761 206 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 NAA25Q14CX7 972 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 TEAD4Q15561 434 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 TGFBIQ15582 683 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 OR4D1Q15615 310 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 TSNQ15631 228 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 CHRNA6Q15825 494 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 ZNF284Q2VY69 593 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 TRMT5Q32P41 509 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 UNC50Q53HI1 259 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 COQ5Q5HYK3 327 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 KANK2Q63ZY3 851 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 SULT1C3Q6IMI6 304 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 FBXL19Q6PCT2 694 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 SBSNQ6UWP8 590 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 FAM151BQ6UXP7 276 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 ATG14Q6ZNE5 492 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 TECPR1Q7Z6L1 1165 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 LDB1Q86U70 411 aaPredicted RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 GATAD2AQ86YP4 633 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 GPSM1Q86YR5 675 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 GALNT13Q8IUC8 556 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 RASGRP3Q8IV61 690 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 ZBTB2Q8N680 514 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 CCNYL1Q8N7R7 359 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 PTGR2Q8N8N7 351 aaPredicted RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 GPR26Q8NDV2 337 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 OR56A4Q8NGH8 313 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 GIMAP7Q8NHV1 300 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 MCUR1Q96AQ8 359 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 LINGO1Q96FE5 620 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 THOC1Q96FV9 657 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 WRAP53Q9BUR4 548 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 FAM83DQ9H4H8 585 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 ZNF395Q9H8N7 513 aaPredicted RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 ARL8BQ9NVJ2 186 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 DNAAF2Q9NVR5 837 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 UTP6Q9NYH9 597 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 TAS2R1Q9NYW7 299 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 GMPR2Q9P2T1 348 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 ZDHHC2Q9UIJ5 367 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 PCTPQ9UKL6 214 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 PRPF19Q9UMS4 504 aaKnown RBP6.92□□□□□ -1.3
VPS11-201ENST00000524454 BTBD3Q9Y2F9 522 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 TRAF6Q9Y4K3 522 aa6.92□□□□□ -1.3
VPS11-201ENST00000524454 TRPM6Q9BX84 2022 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 TDRD6O60522 2096 aaKnown RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 A0A1W2PR77 199 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 IGLON5A6NGN9 336 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 BBIP1A8MTZ0 92 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SUPT3HB4E1H0 165 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 GPR89AB7ZAQ6 455 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 ANKRD65E5RJM6 399 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SDHDO14521 159 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 HGSO14964 777 aaPredicted RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 AZIN1O14977 448 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 AREL1O15033 823 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 GSC2O15499 205 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 LATO43561 262 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 OR1I1O60431 355 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SDC3O75056 442 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 KATNA1O75449 491 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SUPT3HO75486 399 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 TM7SF2O76062 418 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SUPT7LO94864 414 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 CDK14O94921 469 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 CBX6O95503 412 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 CER1O95813 267 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms