RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 RDH12Q96NR8 316 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 NSUN5Q96P11 429 aaKnown RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 AARSD1Q9BTE6 412 aaKnown RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 IER2Q9BTL4 223 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 FSD1LQ9BXM9 530 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 SMG9Q9H0W8 520 aaKnown RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 CHRDQ9H2X0 955 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 NTN4Q9HB63 628 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 PRMT8Q9NR22 394 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 INIPQ9NRY2 104 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 TMLHEQ9NVH6 421 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 RIC8BQ9NVN3 520 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 OBP2AQ9NY56 170 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 ZIM2Q9NZV7 527 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 IFT80Q9P2H3 777 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 NCDNQ9UBB6 729 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 KMT2EQ8IZD2 1858 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 SCN8AQ9UQD0 1980 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 DENND4AQ7Z401 1863 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 IGLV3-10A0A075B6K4 115 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 ATP6AP2A0A1C7CYW4 349 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 E9PAM4 449 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 H3BMM5 538 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 PPP6CO00743 305 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 LCE2BO14633 110 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 STX16O14662 325 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 GIPC1O14908 333 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 ANGPT2O15123 496 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 KERAO60938 352 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 LILRB5O75023 590 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 ATP6AP2O75787 350 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 PRAMEF12O95522 483 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 LDLRP01130 860 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 NPPAP01160 153 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 HNRNPCP07910 306 aaKnown RBP eCLIP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 ENO2P09104 434 aaPredicted RBP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 MBL2P11226 248 aaPredicted RBP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 MTHFD1P11586 935 aaKnown RBP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 HMGA1P17096 107 aaKnown RBP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 TSPAN8P19075 237 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 MATN1P21941 496 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 DDX6P26196 483 aaKnown RBP eCLIP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 PCSK1P29120 753 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 IL12AP29459 219 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 SOX9P48436 509 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 BCAP31P51572 246 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 CCR3P51677 355 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 MLLT10P55197 1068 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 GABARAPL2P60520 117 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 RPS3AP61247 264 aaKnown RBP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 CYP4F8P98187 520 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 GSTM4Q03013 218 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 LIPEQ05469 1076 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 NFYCQ13952 458 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 DAG1Q14118 895 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 LRRC32Q14392 662 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 SEMA3AQ14563 771 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 KIF19Q2TAC6 998 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 ITPRIPL2Q3MIP1 535 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 FGD3Q5JSP0 725 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 PAGE3Q5JUK9 113 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 RBM48Q5RL73 367 aaKnown RBP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 PIK3R6Q5UE93 754 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 TXNDC8Q6A555 127 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 XAF1Q6GPH4 301 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 TBPL2Q6SJ96 375 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 EFL1Q7Z2Z2 1120 aaKnown RBP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 SCD5Q86SK9 330 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 TMEM150AQ86TG1 271 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 PROSER1Q86XN7 944 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 GALNT13Q8IUC8 556 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 OFCC1Q8IZS5 231 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 CMTM8Q8IZV2 173 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 CENPSQ8N2Z9 138 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 SPEM1Q8N4L4 309 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 CYGBQ8WWM9 190 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 SNX19Q92543 992 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 BHMTQ93088 406 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 KIAA1191Q96A73 305 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 FKBP10Q96AY3 582 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 SLC39A13Q96H72 371 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 FCRL2Q96LA5 508 aaPredicted RBP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 DCUN1D5Q9BTE7 237 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 NANOGQ9H9S0 305 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 MID1IP1Q9NPA3 183 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 GKN1Q9NS71 199 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 TDP1Q9NUW8 608 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 TMEM248Q9NWD8 314 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 USE1Q9NZ43 259 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 ZMYM5Q9UJ78 669 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 LEF1Q9UJU2 399 aaPredicted RBP7.67□□□□□ -1.18
SPIDR-223ENST00000524033 IKZF3Q9UKT9 509 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 BLOC1S6Q9UL45 172 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 AURKCQ9UQB9 309 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 MED16Q9Y2X0 877 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 SPTBN4Q9H254 2564 aa7.67□□□□□ -1.18
SPIDR-223ENST00000524033 MYO10Q9HD67 2058 aa7.66□□□□□ -1.18
SPIDR-223ENST00000524033 RIF1Q5UIP0 2472 aaKnown RBP7.66□□□□□ -1.18
SPIDR-223ENST00000524033 A0A1B0GTL3 188 aa7.66□□□□□ -1.18
SPIDR-223ENST00000524033 FAM234BA2RU67 622 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms