RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 DNPEPQ9ULA0 475 aa4.24□□□□□ -1.73
HDAC2-216ENST00000523628 MYO6Q9UM54 1294 aa4.24□□□□□ -1.73
HDAC2-216ENST00000523628 HS3ST2Q9Y278 367 aa4.24□□□□□ -1.73
HDAC2-216ENST00000523628 PCDH15Q96QU1 1955 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 LOC105369274A0A096LPK9 316 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 LOC102723532A0A0G2JNH3 316 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 GXYLT2A0PJZ3 443 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ILVBLA1L0T0 632 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 LRRC3CA6NJW4 275 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 EIF4E1BA6NMX2 242 aaKnown RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 YJEFN3A6XGL0 299 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 PRRT4C9JH25 899 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 E7ENQ6 273 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 MCF2LO15068 1137 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CTIFO43310 598 aaKnown RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 LATO43561 262 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 TBL1XO60907 577 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 PROP1O75360 226 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 DAB1O75553 588 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 GJB3O75712 270 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 BEST1O76090 585 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ACTL6BO94805 426 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 TRUB2O95900 331 aaKnown RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 MBD3O95983 291 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 VIPP01282 170 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 IGLV3-25P01717 112 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CALB1P05937 261 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 PYGLP06737 847 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 SFTPCP11686 197 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CKMT1AP12532 417 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 HLA-EP13747 358 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ZNF18P17022 549 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 KELP23276 732 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 HLA-FP30511 346 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CDH5P33151 784 aaPredicted RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ANP32AP39687 249 aaKnown RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 PTGER3P43115 390 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 MTIF2P46199 727 aaKnown RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 RABIFP47224 123 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 GABRB2P47870 512 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 YBEYP58557 167 aaPredicted RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 HNRNPKP61978 463 aaKnown RBP eCLIP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 TPM4P67936 248 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 MRPS35P82673 323 aaKnown RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ZXDBP98169 803 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ELP6Q0PNE2 266 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 EIF3IQ13347 325 aaKnown RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 PDCLQ13371 301 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 PNOCQ13519 176 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 KCNJ12Q14500 433 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CLCA4Q14CN2 919 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 PDCD2Q16342 344 aaPredicted RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 SLC25A52Q3SY17 297 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CBWD6Q4V339 395 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CBWD3Q5JTY5 395 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CBWD5Q5RIA9 395 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 KAZNQ674X7 775 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CYB5D1Q6P9G0 228 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 VPS36Q86VN1 386 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 LRRC49Q8IUZ0 686 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 SLC44A2Q8IWA5 706 aaPredicted RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 OR4N4Q8N0Y3 316 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 BBS5Q8N3I7 341 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 AVL9Q8NBF6 648 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ABHD5Q8WTS1 349 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ZNF606Q8WXB4 792 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 RFFLQ8WZ73 363 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CCT6BQ92526 530 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 NAT6Q93015 286 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 PPP1R13BQ96KQ4 1090 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 RPRD1AQ96P16 312 aaPredicted RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ALG8Q9BVK2 526 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 GPR174Q9BXC1 333 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 B3GNT4Q9C0J1 378 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 INTS2Q9H0H0 1204 aaKnown RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 SDCBP2Q9H190 292 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 GAREM1Q9H706 876 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CATSPERBQ9H7T0 1116 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 NMUR1Q9HB89 426 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 UBE2TQ9NPD8 197 aaPredicted RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 DUSP22Q9NRW4 184 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 TMEM30AQ9NV96 361 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 DDIT4Q9NX09 232 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 FBXL12Q9NXK8 326 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CHMP5Q9NZZ3 219 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 LRIT1Q9P2V4 623 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 HMGXB4Q9UGU5 601 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 CSNK1G3Q9Y6M4 447 aa4.23□□□□□ -1.73
HDAC2-216ENST00000523628 MYO18AQ92614 2054 aaKnown RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 ARHGEF17Q96PE2 2063 aaPredicted RBP4.23□□□□□ -1.73
HDAC2-216ENST00000523628 MUC22E2RYF6 1773 aaPredicted RBP4.22□□□□□ -1.73
HDAC2-216ENST00000523628 NYNRINQ9P2P1 1898 aaKnown RBP4.22□□□□□ -1.73
HDAC2-216ENST00000523628 DNAH14Q0VDD8 3507 aa4.22□□□□□ -1.73
HDAC2-216ENST00000523628 A0A1B0GTQ1 180 aa4.22□□□□□ -1.73
HDAC2-216ENST00000523628 PLRG1O43660 514 aaKnown RBP4.22□□□□□ -1.73
HDAC2-216ENST00000523628 CCNT2O60583 730 aaKnown RBP4.22□□□□□ -1.73
HDAC2-216ENST00000523628 PRAMEF2O60811 474 aa4.22□□□□□ -1.73
HDAC2-216ENST00000523628 LETM1O95202 739 aaPredicted RBP4.22□□□□□ -1.73
HDAC2-216ENST00000523628 TBX18O95935 607 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms