RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 TRIM38O00635 465 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 LIN7AO14910 233 aaPredicted RBP16.41■□□□□ 0.22
SREK1-212ENST00000522912 ANGPT2O15123 496 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 RGS14O43566 566 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 VEGFDO43915 354 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 POP7O75817 140 aaKnown RBP16.41■□□□□ 0.22
SREK1-212ENST00000522912 PCCBP05166 539 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 G6PDP11413 515 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 SLC2A4P14672 509 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 GTF2H3Q13889 308 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 GGTA1PQ4G0N0 100 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 CRTC3Q6UUV7 619 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 RGL4Q8IZJ4 473 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 SMRP1Q8NCR6 262 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 TSPEARQ8WU66 669 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 VPS33AQ96AX1 596 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 LINC00615Q96LM1 132 aaPredicted RBP16.41■□□□□ 0.22
SREK1-212ENST00000522912 CCDC138Q96M89 665 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 GPATCH1Q9BRR8 931 aaKnown RBP16.41■□□□□ 0.22
SREK1-212ENST00000522912 ACTL8Q9H568 366 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 TMEM181Q9P2C4 612 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 POLR3HQ9Y535 204 aaPredicted RBP16.41■□□□□ 0.22
SREK1-212ENST00000522912 MTCH2Q9Y6C9 303 aa16.41■□□□□ 0.22
SREK1-212ENST00000522912 ANKRD28O15084 1053 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 PDYNP01213 254 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 TCN1P20061 433 aaPredicted RBP16.4■□□□□ 0.22
SREK1-212ENST00000522912 CTHP32929 405 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 POLR2JP52435 117 aaKnown RBP16.4■□□□□ 0.22
SREK1-212ENST00000522912 TMEM196Q5HYL7 178 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 AGTRAPQ6RW13 159 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 CYP20A1Q6UW02 462 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 RNF111Q6ZNA4 994 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 C11orf96Q7Z7L8 435 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 KBTBD6Q86V97 674 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 HEATR4Q86WZ0 1026 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 ZNF514Q96K75 400 aaPredicted RBP16.4■□□□□ 0.22
SREK1-212ENST00000522912 IL1RL2Q9HB29 575 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 SPAG4Q9NPE6 437 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 CD300AQ9UGN4 299 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 ANGPTL2Q9UKU9 493 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 GPR34Q9UPC5 381 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 COL4A2P08572 1712 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 A0A1W2PP18 115 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 FXYD1O00168 92 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 ACOT8O14734 319 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 C1orf105O95561 183 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 KRT6AP02538 564 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 KRT6BP04259 564 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 KRT6CP48668 564 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 KCNK10P57789 538 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 RPL38P63173 70 aaKnown RBP16.4■□□□□ 0.22
SREK1-212ENST00000522912 NAE1Q13564 534 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 FLOT2Q14254 428 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 NUMA1Q14980 2115 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 PLA2G4EQ3MJ16 856 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 COQ5Q5HYK3 327 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 ZNF776Q68DI1 518 aaPredicted RBP16.4■□□□□ 0.22
SREK1-212ENST00000522912 LRRC74BQ6ZQY2 392 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 THOC6Q86W42 341 aaKnown RBP16.4■□□□□ 0.22
SREK1-212ENST00000522912 OR2T3Q8NH03 318 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 NUDT8Q8WV74 236 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 FOPNLQ96NB1 174 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 LGR4Q9BXB1 951 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 MKRN2Q9H000 416 aaKnown RBP16.4■□□□□ 0.22
SREK1-212ENST00000522912 SLC6A17Q9H1V8 727 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 MBNL1Q9NR56 388 aaKnown RBP16.4■□□□□ 0.22
SREK1-212ENST00000522912 ZFR2Q9UPR6 939 aaKnown RBP16.4■□□□□ 0.22
SREK1-212ENST00000522912 PRKAB1Q9Y478 270 aa16.4■□□□□ 0.22
SREK1-212ENST00000522912 C17orf113A0A1B0GUU1 675 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 FAM234BA2RU67 622 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 PRORSD1PA6NEY8 169 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 MAP3K7O43318 606 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 ADAM23O75077 832 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 RNASEH2AO75792 299 aaKnown RBP16.39■□□□□ 0.21
SREK1-212ENST00000522912 RSL1D1O76021 490 aaKnown RBP16.39■□□□□ 0.21
SREK1-212ENST00000522912 BAG2O95816 211 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 SLC16A8O95907 504 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 EGFP01133 1207 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 IMPA1P29218 277 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 NTSR1P30989 418 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 MAPK9P45984 424 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 NEK2P51955 445 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 YBX1P67809 324 aaKnown RBP16.39■□□□□ 0.21
SREK1-212ENST00000522912 CDK3Q00526 305 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 CHIT1Q13231 466 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 FGL2Q14314 439 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 NFE2L1Q14494 772 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 TLR1Q15399 786 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 SMU1Q2TAY7 513 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 PAGE3Q5JUK9 113 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 HABP4Q5JVS0 413 aaKnown RBP16.39■□□□□ 0.21
SREK1-212ENST00000522912 DOK6Q6PKX4 331 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 FAM83HQ6ZRV2 1179 aaPredicted RBP16.39■□□□□ 0.21
SREK1-212ENST00000522912 KLHDC8AQ8IYD2 350 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 PPFIBP2Q8ND30 876 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 OR2L2Q8NH16 312 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 ATL1Q8WXF7 558 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 GABRG3Q99928 467 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 ACPTQ9BZG2 426 aa16.39■□□□□ 0.21
SREK1-212ENST00000522912 H3BNX3 289 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms