RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 A0A0U1RRA0 63 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 A0A1W2PPW3 197 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 KANSL1LA0AUZ9 987 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 ANKRD61A6NGH8 418 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 OGTO15294 1046 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CYP27B1O15528 508 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 ADAM12O43184 909 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 LRRTM2O43300 516 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 DCXO43602 365 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 PLPP2O43688 288 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 PRAF2O60831 178 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 ATP2C2O75185 946 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 ATP6V1G1O75348 118 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CSO75390 466 aaKnown RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 CD63P08962 238 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 ZNF18P17022 549 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 MPZP25189 248 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 YWHAQP27348 245 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CYP2C18P33260 490 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 BMI1P35226 326 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CETN2P41208 172 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 SUCLG1P53597 346 aaKnown RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 AP3M2P53677 418 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 MTCP1P56278 107 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CDK3Q00526 305 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 HSPA14Q0VDF9 509 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 HNRNPDQ14103 355 aaKnown RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 PDIA5Q14554 519 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 LRIT3Q3SXY7 679 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 BCL7AQ4VC05 210 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 SYTL3Q4VX76 610 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 TSTD2Q5T7W7 516 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 ARMC12Q5T9G4 340 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CES5AQ6NT32 575 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 LRRC55Q6ZSA7 311 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 MEPCEQ7L2J0 689 aaKnown RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 CENPQQ7L2Z9 268 aaPredicted RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 NANOGNBQ7Z5D8 188 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 IRF2BP2Q7Z5L9 587 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 TECPR1Q7Z6L1 1165 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 PHLDB2Q86SQ0 1253 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CCDC190Q86UF4 302 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 SRRM1Q8IYB3 904 aaKnown RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 APCDD1Q8J025 514 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 C1orf87Q8N0U7 546 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 AADATQ8N5Z0 425 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 ZNF611Q8N823 705 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 BCORP1Q8N888 145 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CCDC63Q8NA47 563 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 TP53I13Q8NBR0 393 aaPredicted RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 LILRB4Q8NHJ6 448 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 TBC1D16Q8TBP0 767 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 HDAC7Q8WUI4 952 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 FCGR1BQ92637 280 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 DHX58Q96C10 678 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 VCPIP1Q96JH7 1222 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 IFT74Q96LB3 600 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 TAAR6Q96RI8 345 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 MYADMQ96S97 322 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 FICDQ9BVA6 458 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CRNKL1Q9BZJ0 848 aaKnown RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 GLT8D2Q9H1C3 349 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 PNNQ9H307 717 aaKnown RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 CUEDC2Q9H467 287 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 RIOX1Q9H6W3 641 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 DBNLQ9UJU6 430 aaKnown RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 AGO2Q9UKV8 859 aaKnown RBP3.89□□□□□ -1.79
SKP1-209ENST00000522552 PCDHA12Q9UN75 941 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 CTNND2Q9UQB3 1225 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 PADI2Q9Y2J8 665 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 COMMD3-BMI1R4GMX3 469 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 HEG1Q9ULI3 1381 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 MST1RQ04912 1400 aa3.89□□□□□ -1.79
SKP1-209ENST00000522552 A0A0U1RQS6 177 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 A0A1W2PN81 502 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 ILVBLA1L0T0 632 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 HELTA6NFD8 242 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 HEPACAM2A8MVW5 462 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 NDUFS8O00217 210 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 SLC28A1O00337 649 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 NDUFS4O43181 175 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 DNAJB6O75190 326 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 SNNO75324 88 aaPredicted RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 OR6A2O95222 327 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 LUC7L3O95232 432 aaKnown RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 MMP10P09238 476 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 UBTFL6P0CB48 400 aaPredicted RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 ZCCHC18P0CG32 403 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 RALBP11234 206 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 KRT3P12035 628 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 RPL13P26373 211 aaKnown RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 CHMLP26374 656 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 CHRNA7P36544 502 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 ABCG1P45844 678 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 LHX1P48742 406 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 TPTEP56180 551 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 DLK1P80370 383 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 ROR2Q01974 943 aaKnown RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 CFHR1Q03591 330 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 GK2Q14410 553 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms