RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 PRRT4C9JH25 899 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 GFYI3L273 518 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 NPPAP01160 153 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 TCF3P15923 654 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 OR4D2P58180 307 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 SP140Q13342 867 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 SELPLGQ14242 412 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 GK3PQ14409 553 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 AASDHQ4L235 1098 aaPredicted RBP13.66□□□□□ -0.22
SMIM12-206ENST00000521580 SUSD1Q6UWL2 747 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 UGT2A3Q6UWM9 527 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 MARVELD2Q8N4S9 558 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 RASGEF1AQ8N9B8 481 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 ZNF106Q9H2Y7 1883 aaKnown RBP13.66□□□□□ -0.22
SMIM12-206ENST00000521580 GEMIN8Q9NWZ8 242 aaKnown RBP13.66□□□□□ -0.22
SMIM12-206ENST00000521580 UBAP1Q9NZ09 502 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 DKK3Q9UBP4 350 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 ARNTLO00327 626 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 WNT9AO14904 365 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 HNRNPRO43390 633 aaKnown RBP13.66□□□□□ -0.22
SMIM12-206ENST00000521580 KCNH1O95259 989 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 FASP25445 335 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 AP1S2P56377 157 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 GPM6BQ13491 265 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 PWP1Q13610 501 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 SPATS1Q496A3 300 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 LDLRAP1Q5SW96 308 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 TECPR1Q7Z6L1 1165 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 ADGRG5Q8IZF4 528 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 UHRF1Q96T88 793 aaPredicted RBP13.66□□□□□ -0.22
SMIM12-206ENST00000521580 SEPHS2Q99611 448 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 DEC1Q9P2X7 70 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 PCDHGB4Q9UN71 923 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 PCDHGB5Q9Y5G0 923 aa13.66□□□□□ -0.22
SMIM12-206ENST00000521580 C7orf72A4D263 438 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 C5orf67F2Z3F1 127 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 PLK4O00444 970 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 IFRD1O00458 451 aaPredicted RBP13.65□□□□□ -0.22
SMIM12-206ENST00000521580 DFNA5O60443 496 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 ATG13O75143 517 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 CAPNS1P04632 268 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 BCKDHAP12694 445 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 TMEM115Q12893 351 aaPredicted RBP13.65□□□□□ -0.22
SMIM12-206ENST00000521580 CHIT1Q13231 466 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 FAM109BQ6ICB4 259 aaPredicted RBP13.65□□□□□ -0.22
SMIM12-206ENST00000521580 IYDQ6PHW0 289 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 TMEM220Q6QAJ8 160 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 PIP4K2CQ8TBX8 421 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 BPIFB1Q8TDL5 484 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 MED8Q96G25 268 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 THUMPD3Q9BV44 507 aaKnown RBP13.65□□□□□ -0.22
SMIM12-206ENST00000521580 SLC16A5O15375 505 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 HOXC11O43248 304 aaPredicted RBP13.65□□□□□ -0.22
SMIM12-206ENST00000521580 MT-ND1P03886 318 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 RB1P06400 928 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 SLC6A12P48065 614 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 IRF8Q02556 426 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 PRKCQQ04759 706 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 FAM78AQ5JUQ0 283 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 TTC23LQ6PF05 361 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 TRIM74Q86UV6 250 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 TSSK3Q96PN8 268 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 MUC13Q9H3R2 512 aa13.65□□□□□ -0.22
SMIM12-206ENST00000521580 CNOT11Q9UKZ1 510 aaKnown RBP13.65□□□□□ -0.22
SMIM12-206ENST00000521580 ARHGEF33A8MVX0 844 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 QSOX1O00391 747 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 MAP3K13O43283 966 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 PRNPP04156 253 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 PGRP06401 933 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 DDX39BQ13838 428 aaKnown RBP13.65□□□□□ -0.23
SMIM12-206ENST00000521580 GLYATQ6IB77 296 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 APLFQ8IW19 511 aaPredicted RBP13.65□□□□□ -0.23
SMIM12-206ENST00000521580 NSMCE2Q96MF7 247 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 OR52E6Q96RD3 313 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 ZDHHC4Q9NPG8 344 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 VAPAQ9P0L0 249 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 ANAPC2Q9UJX6 822 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 DLGAP4Q9Y2H0 992 aa13.65□□□□□ -0.23
SMIM12-206ENST00000521580 OTOL1A6NHN0 477 aaPredicted RBP13.64□□□□□ -0.23
SMIM12-206ENST00000521580 GPIP06744 558 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 RPS14P62263 151 aaKnown RBP13.64□□□□□ -0.23
SMIM12-206ENST00000521580 NAE1Q13564 534 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 PTRH1Q86Y79 214 aaKnown RBP13.64□□□□□ -0.23
SMIM12-206ENST00000521580 RNF175Q8N4F7 328 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 RPF2Q9H7B2 306 aaKnown RBP13.64□□□□□ -0.23
SMIM12-206ENST00000521580 PLXNB3Q9ULL4 1909 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 RNF103-CHMP3A0A140T963 221 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 GRXCR2A6NFK2 248 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 PDLIM1O00151 329 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 GMNNO75496 209 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 SLCO2B1O94956 709 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 NFATC1O95644 943 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 HTR1EP28566 365 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 NRIP1P48552 1158 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 KIAA0040Q15053 153 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 SMU1Q2TAY7 513 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 GLB1L3Q8NCI6 653 aaPredicted RBP13.64□□□□□ -0.23
SMIM12-206ENST00000521580 TRPV3Q8NET8 790 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 APOLD1Q96LR9 279 aa13.64□□□□□ -0.23
SMIM12-206ENST00000521580 SOCS2O14508 198 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms