RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 GANABQ14697 944 aaKnown RBP11.47□□□□□ -0.57
SYNPO-204ENST00000519664 ANXA8L1Q5VT79 327 aa11.47□□□□□ -0.57
SYNPO-204ENST00000519664 STEAP4Q687X5 459 aa11.47□□□□□ -0.57
SYNPO-204ENST00000519664 GOLGA7Q7Z5G4 137 aa11.47□□□□□ -0.57
SYNPO-204ENST00000519664 SLC45A3Q96JT2 553 aa11.47□□□□□ -0.57
SYNPO-204ENST00000519664 PRRG3Q9BZD7 231 aa11.47□□□□□ -0.57
SYNPO-204ENST00000519664 CLIC1O00299 241 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 QSOX1O00391 747 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 SLC31A1O15431 190 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 GPR39O43194 453 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 TMCC2O75069 709 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 ITGA2P17301 1181 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 IGFBP6P24592 240 aaPredicted RBP11.46□□□□□ -0.57
SYNPO-204ENST00000519664 CXCR2P25025 360 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 PTPN5P54829 565 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 ZNF846Q147U1 533 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 KLHL12Q53G59 568 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 RTP2Q5QGT7 225 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 C6orf183Q5T699 404 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 PSRC1Q6PGN9 363 aaPredicted RBP11.46□□□□□ -0.57
SYNPO-204ENST00000519664 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.46□□□□□ -0.57
SYNPO-204ENST00000519664 R3HCC1LQ7Z5L2 792 aaKnown RBP11.46□□□□□ -0.57
SYNPO-204ENST00000519664 OR2AP1Q8NGE2 309 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 NRG4Q8WWG1 115 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 DNAJC15Q9Y5T4 150 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 EVPLQ92817 2033 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 PRORSD1PA6NEY8 169 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 SLC22A2O15244 555 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 SCELO95171 688 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 PGLSO95336 258 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 LEPRP48357 1165 aaKnown RBP11.46□□□□□ -0.57
SYNPO-204ENST00000519664 NUDT6P53370 316 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 TRAP1Q12931 704 aaKnown RBP11.46□□□□□ -0.57
SYNPO-204ENST00000519664 CEP78Q5JTW2 689 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 LRRC66Q68CR7 880 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 RANBP10Q6VN20 620 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 UMODL1-AS1Q8N2C9 162 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 ZNF461Q8TAF7 563 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 ENKURQ8TC29 256 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 CSGALNACT1Q8TDX6 532 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 TP53INP1Q96A56 240 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 ACDQ96AP0 544 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 CXorf40BQ96DE9 158 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 VMP1Q96GC9 406 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 IL12RB2Q99665 862 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 ENOPH1Q9UHY7 261 aa11.46□□□□□ -0.57
SYNPO-204ENST00000519664 JUNP05412 331 aaKnown RBP11.46□□□□□ -0.58
SYNPO-204ENST00000519664 PABPC4LP0CB38 370 aaKnown RBP11.46□□□□□ -0.58
SYNPO-204ENST00000519664 ARSAP15289 507 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 KCNA5P22460 613 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 DAG1Q14118 895 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 NANOGP8Q6NSW7 305 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 GET4Q7L5D6 327 aaPredicted RBP11.46□□□□□ -0.58
SYNPO-204ENST00000519664 CLIP4Q8N3C7 705 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 KDM1BQ8NB78 822 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 C1GALT1C1Q96EU7 318 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 DUSP26Q9BV47 211 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 NANOGQ9H9S0 305 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 ACTR3BQ9P1U1 418 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 EMCNQ9ULC0 261 aa11.46□□□□□ -0.58
SYNPO-204ENST00000519664 COL18A1P39060 1754 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 A0A1W2PPW3 197 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 C2orf78A6NCI8 922 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 AREL1O15033 823 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 PCCBP05166 539 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 GALTP07902 379 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 MAPK12P53778 367 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 PCBP2Q15366 365 aaKnown RBP eCLIP11.45□□□□□ -0.58
SYNPO-204ENST00000519664 TIMM50Q3ZCQ8 353 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 MED27Q6P2C8 311 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 DEPDC4Q8N2C3 294 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 ZNF557Q8N988 423 aaPredicted RBP11.45□□□□□ -0.58
SYNPO-204ENST00000519664 LEMD2Q8NC56 503 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 S100ZQ8WXG8 99 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 ARMC5Q96C12 935 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 TIFAQ96CG3 184 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 SORT1Q99523 831 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 MARCH7Q9H992 704 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 ABCB9Q9NP78 766 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 SRRDQ9UH36 339 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 SCN9AQ15858 1988 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 FAM163BP0C2L3 166 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 CD1DP15813 335 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 PREPP48147 710 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 SRP54P61011 504 aaKnown RBP11.45□□□□□ -0.58
SYNPO-204ENST00000519664 C18orf21Q32NC0 220 aaPredicted RBP11.45□□□□□ -0.58
SYNPO-204ENST00000519664 MACC1Q6ZN28 852 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 RNF44Q7L0R7 432 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 SCD5Q86SK9 330 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 AHI1Q8N157 1196 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 UBE2J2Q8N2K1 259 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 C1orf52Q8N6N3 182 aaKnown RBP11.45□□□□□ -0.58
SYNPO-204ENST00000519664 BEND7Q8N7W2 519 aaPredicted RBP11.45□□□□□ -0.58
SYNPO-204ENST00000519664 RSPH9Q9H1X1 276 aaPredicted RBP11.45□□□□□ -0.58
SYNPO-204ENST00000519664 Q9Y3F1 56 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 WNT6Q9Y6F9 365 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 INPPL1O15357 1258 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 OR1F1O43749 312 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 TULP3O75386 442 aa11.45□□□□□ -0.58
SYNPO-204ENST00000519664 SERPINB7O75635 380 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms