RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 ZBTB2Q8N680 514 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 ZBTB8BQ8NAP8 495 aaPredicted RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 ABHD11Q8NFV4 315 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 SNRNP27Q8WVK2 155 aaKnown RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 ITPKCQ96DU7 683 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 NODALQ96S42 347 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 TMEM175Q9BSA9 504 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 HTATIP2Q9BUP3 242 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 BOCQ9BWV1 1114 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 KLF16Q9BXK1 252 aaPredicted RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 AKIP1Q9NQ31 210 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 FARSBQ9NSD9 589 aaKnown RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 GIN1Q9NXP7 522 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 BAG5Q9UL15 447 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 ZNF490Q9ULM2 529 aaPredicted RBP6.52□□□□□ -1.37
CDH12-203ENST00000517378 GABRQQ9UN88 632 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 COQ6Q9Y2Z9 468 aa6.52□□□□□ -1.37
CDH12-203ENST00000517378 KCNE1BA0A087WTH5 132 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 EIF3FO00303 357 aaPredicted RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 PER2O15055 1255 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 NOBOXO60393 691 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 BCKDHAP12694 445 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 HMGA1P17096 107 aaKnown RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 EPORP19235 508 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 ITGALP20701 1170 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 AGXTP21549 392 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 CCND3P30281 292 aaPredicted RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 CA5AP35218 305 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 ARL1P40616 181 aaPredicted RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 CSNK1DP48730 415 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 RAD23AP54725 363 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 FCGRTP55899 365 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 PHC1P78364 1004 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 ABHD18Q0P651 414 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 TWF1Q12792 350 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 BFSP2Q13515 415 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 RGS21Q2M5E4 152 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 ARMC12Q5T9G4 340 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 CPZQ66K79 652 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 SERPINA11Q86U17 422 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 IGFN1Q86VF2 1251 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 HS3ST5Q8IZT8 346 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 CBARPQ8N350 705 aaPredicted RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 KRTCAP2Q8N6L1 136 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 ARL10Q8N8L6 244 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 DCAF4L2Q8NA75 395 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 FAR1Q8WVX9 515 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 SH3YL1Q96HL8 342 aaPredicted RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 PYURFQ96I23 114 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 FCRL1Q96LA6 429 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 OR52E6Q96RD3 313 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 ACPTQ9BZG2 426 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 GPR63Q9BZJ6 419 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 WDR12Q9GZL7 423 aaKnown RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 LTB4R2Q9NPC1 389 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 NECTIN3Q9NQS3 549 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 SLC6A13Q9NSD5 602 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 WWOXQ9NZC7 414 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 KLQ9UEF7 1012 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 ZMYM5Q9UJ78 669 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 PCDHB9Q9Y5E1 797 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 PCDHB14Q9Y5E9 798 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 PRSS21Q9Y6M0 314 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 MKI67P46013 3256 aaKnown RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 A0A0U1RQS6 177 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 ZNF99A8MXY4 864 aaPredicted RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 CLDN25C9JDP6 229 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 BCKDKO14874 412 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 SLC22A1O15245 554 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 DPM1O60762 260 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 SOCS5O75159 536 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 SERPINB7O75635 380 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 SLC25A14O95258 325 aaPredicted RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 SERPINA1P01009 418 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 PRPS2P11908 318 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 EPB42P16452 691 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 IDUAP35475 653 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 TUFMP49411 452 aaKnown RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 ZNF157P51786 506 aaPredicted RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 PTPN5P54829 565 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 RHOAP61586 193 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 RPS14P62263 151 aaKnown RBP6.51□□□□□ -1.37
CDH12-203ENST00000517378 HMGCS1Q01581 520 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 CDK5R2Q13319 367 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 LAPTM5Q13571 262 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 GBX1Q14549 363 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 ZNF846Q147U1 533 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 OXA1LQ15070 435 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 IMPG1Q17R60 797 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 GPR33Q49SQ1 333 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 GTDC1Q4AE62 458 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 CRTC3Q6UUV7 619 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 FAM151BQ6UXP7 276 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 LINGO4Q6UY18 593 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 LRRC70Q7Z2Q7 622 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 TRIM74Q86UV6 250 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 TRIM73Q86UV7 250 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 CRIPAKQ8N1N5 446 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 TMEM132CQ8N3T6 1108 aa6.51□□□□□ -1.37
CDH12-203ENST00000517378 CPA6Q8N4T0 437 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms