RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 GABRB1P18505 474 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CDC25CP30307 473 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TSFMP43897 325 aaKnown RBP2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ARSEP51690 589 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MAZP56270 477 aaKnown RBP2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 KRTAP12-2P59991 146 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TMF1P82094 1093 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PAX8Q06710 450 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CALCOCO2Q13137 446 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 NR1D2Q14995 579 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ITPRIPL2Q3MIP1 535 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MOGAT2Q3SYC2 334 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 HIGD2BQ4VC39 106 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 Q6ZR54 194 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TBC1D1Q86TI0 1168 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TMEM139Q8IV31 216 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 AFAP1Q8N556 730 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 Q8NBF4 154 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 OR5M8Q8NGP6 311 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ZPLD1Q8TCW7 415 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ZNF414Q96IQ9 312 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PPM1MQ96MI6 270 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 NEK1Q96PY6 1258 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SRSF8Q9BRL6 282 aaKnown RBP2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 C16orf70Q9BSU1 422 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 KCNK15Q9H427 330 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SMARCAD1Q9H4L7 1026 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MED20Q9H944 212 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CHST11Q9NPF2 352 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 KRT84Q9NSB2 600 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 OLA1Q9NTK5 396 aaKnown RBP2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 GPR83Q9NYM4 423 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 HACL1Q9UJ83 578 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ZHX1Q9UKY1 873 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MTUS1Q9ULD2 1270 aa2.35□□□□□ -2.03
RNU6-1088P-201ENST00000516850 XRCC3O43542 346 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MITFO75030 526 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 OR2C1O95371 312 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SCGB1D1O95968 90 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 IGKV3-15P01624 115 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PRKAR1AP10644 381 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 MMP9P14780 707 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 GJA1P17302 382 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ITIH1P19827 911 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CYP2A7P20853 494 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CDH3P22223 829 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PIK3R1P27986 724 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 LEPRP48357 1165 aaKnown RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SLC9A3P48764 834 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TPD52P55327 224 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 B3GALT5-AS1P59052 145 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CDK3Q00526 305 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SETQ01105 290 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SQLEQ14534 574 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ELFN2Q5R3F8 820 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 HAUS3Q68CZ6 603 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 Q6ZRP5 223 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CLEC17AQ6ZS10 378 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 OR52N5Q8NH56 324 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 USP6NLQ92738 828 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 LRRC59Q96AG4 307 aaKnown RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 CENPTQ96BT3 561 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SAT2Q96F10 170 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 SLC45A3Q96JT2 553 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PRICKLE1Q96MT3 831 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 NECTIN4Q96NY8 510 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 AGAP4Q96P64 663 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 NKX3-1Q99801 234 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PANK2Q9BZ23 570 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 PUS3Q9BZE2 481 aaKnown RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 DPAGT1Q9H3H5 408 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 EIF2B3Q9NR50 452 aaKnown RBP2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 OSER1Q9NX31 292 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 STK26Q9P289 416 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 AASSQ9UDR5 926 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 TNNQ9UQP3 1299 aa2.34□□□□□ -2.03
RNU6-1088P-201ENST00000516850 ZNF644Q9H582 1327 aaPredicted RBP2.34□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MPTX1A8MV57 137 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 GLRA3O75311 464 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MED24O75448 989 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 CDK2AP2O75956 126 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SEC24AO95486 1093 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SLC2A2P11168 524 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 HLA-FP30511 346 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MAN1A1P33908 653 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 MFAP4P55083 255 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SIRPAP78324 504 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 KRT32Q14532 448 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ODF4Q2M2E3 257 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 ALFQ53S48 1182 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 NOTUMQ6P988 496 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 SLC25A47Q6Q0C1 308 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 FIGLAQ6QHK4 219 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 TMEM207Q6UWW9 146 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 G2E3Q7L622 706 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 HAUS6Q7Z4H7 955 aa2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 LDB1Q86U70 411 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1088P-201ENST00000516850 RTN4RL2Q86UN3 420 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms