RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SLC35F6Q8N357 371 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 KIR3DL3Q8N743 410 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CEP112Q8N8E3 955 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 C12orf29Q8N999 325 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TMEM35BQ8NCS4 154 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 ZMIZ2Q8NF64 920 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 AENQ8WTP8 325 aaKnown RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 OR1E3Q8WZA6 343 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TFAP2BQ92481 460 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TMA16Q96EY4 203 aaKnown RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 BTBD6Q96KE9 485 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 FAM84AQ96KN4 292 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 C9orf72Q96LT7 481 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 HS3ST6Q96QI5 342 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TWNKQ96RR1 684 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 KCNK16Q96T55 309 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC38A3Q99624 504 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MED10Q9BTT4 135 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TUBB2BQ9BVA1 445 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 SUCNR1Q9BXA5 334 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 HDAC8Q9BY41 377 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 VPS16Q9H269 839 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 GANQ9H2C0 597 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 RETREG1Q9H6L5 497 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 NOL6Q9H6R4 1146 aaKnown RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 FAM204AQ9H8W3 233 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 KCNK13Q9HB14 408 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MED4Q9NPJ6 270 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 KRT82Q9NSB4 513 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 ABCC13Q9NSE7 274 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 OLA1Q9NTK5 396 aaKnown RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TAB2Q9NYJ8 693 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MTRF1LQ9UGC7 380 aaKnown RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 HMGXB4Q9UGU5 601 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 GDF2Q9UK05 429 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 FBXL4Q9UKA2 621 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TSPAN16Q9UKR8 245 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 RARRES3Q9UL19 164 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 TTC7AQ9ULT0 858 aaPredicted RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CAPN11Q9UMQ6 739 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 MRPS2Q9Y399 296 aaKnown RBP3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 CEP83Q9Y592 693 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 NME7Q9Y5B8 376 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 PCDHB4Q9Y5E5 795 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 FADS3Q9Y5Q0 445 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 VPS13DQ5THJ4 4388 aa3.02□□□□□ -1.93
SCARNA13-201ENST00000516672 ANKRD12Q6UB98 2062 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 CCDC189A1A4V9 331 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 C5orf63A6NC05 138 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 ANKRD65E5RJM6 399 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 OVOL3O00110 214 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 PDE2AO00408 941 aaPredicted RBP3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 CLDN5O00501 218 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 PES1O00541 588 aaKnown RBP3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 TTI1O43156 1089 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 IRAK2O43187 625 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 AP1G1O43747 822 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 NRDCO43847 1150 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 VEGFDO43915 354 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF354AO60765 605 aaPredicted RBP3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 HSF2BPO75031 334 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 SCRG1O75711 98 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 BEST1O76090 585 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 CLSTN1O94985 981 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 ONECUT2O95948 504 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 C9P02748 559 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 GYPCP04921 128 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 SERPING1P05155 500 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 HMBSP08397 361 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 CSF1P09603 554 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 CCDC175P0C221 793 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 MYBL1P10243 752 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC2A3P11169 496 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 RALAP11233 206 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 CCDC130P13994 396 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 CCNB1P14635 433 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 TIMP2P16035 220 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 MMP8P22894 467 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 OMGP23515 440 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 HNRNPH1P31943 449 aaKnown RBP3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 GFERP55789 205 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 POLR2FP61218 127 aaKnown RBP3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 YWHAZP63104 245 aaKnown RBP3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 TUBB3Q13509 450 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 HLXQ14774 488 aaPredicted RBP3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 AGERQ15109 404 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 GOLGA7BQ2TAP0 167 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF394Q53GI3 561 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF766Q5HY98 468 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 PITRM1Q5JRX3 1037 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 NKAPLQ5M9Q1 402 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 C10orf120Q5SQS8 335 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 MPP7Q5T2T1 576 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 PMF1Q6P1K2 205 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 MSANTD2Q6P1R3 559 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 CYB5D1Q6P9G0 228 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 CLEC2AQ6UVW9 174 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 LEKR1Q6ZMV7 388 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF662Q6ZS27 426 aa3.01□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC26A9Q7LBE3 791 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms