RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 OR52E1Q8NGJ3 308 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 OR9A1PQ8NGU1 263 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 BAHD1Q8TBE0 780 aaPredicted RBP20.39■□□□□ 0.85
LSM6-207ENST00000515311 SCYL1Q96KG9 808 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 CCDC138Q96M89 665 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 RAB11FIP5Q9BXF6 653 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 IQCGQ9H095 443 aaKnown RBP20.39■□□□□ 0.85
LSM6-207ENST00000515311 TMEM216Q9P0N5 145 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 SPATA7Q9P0W8 599 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 LRIT1Q9P2V4 623 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 FTSJ1Q9UET6 329 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.38■□□□□ 0.85
LSM6-207ENST00000515311 EME2A4GXA9 379 aaPredicted RBP20.38■□□□□ 0.85
LSM6-207ENST00000515311 HMGB1P1B2RPK0 211 aaPredicted RBP20.38■□□□□ 0.85
LSM6-207ENST00000515311 CBFA2T3O75081 653 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 LDOC1O95751 146 aaPredicted RBP20.38■□□□□ 0.85
LSM6-207ENST00000515311 TPBGLP0DKB5 382 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 CREB1P16220 341 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 SHMT2P34897 504 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 HSD17B2P37059 387 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 MAGOHP61326 146 aaKnown RBP20.38■□□□□ 0.85
LSM6-207ENST00000515311 ARHGAP19Q14CB8 494 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 TGFBIQ15582 683 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 CCDC153Q494R4 210 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 TTMPQ5BVD1 217 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 N4BP2L1Q5TBK1 243 aaPredicted RBP20.38■□□□□ 0.85
LSM6-207ENST00000515311 PIP4P1Q86T03 277 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 RAB42Q8N4Z0 105 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 CNDP2Q96KP4 475 aaKnown RBP20.38■□□□□ 0.85
LSM6-207ENST00000515311 PKP4Q99569 1192 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 CDC6Q99741 560 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 MENTQ9BUN1 341 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 ARL15Q9NXU5 204 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 XPR1Q9UBH6 696 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 EMCNQ9ULC0 261 aa20.38■□□□□ 0.85
LSM6-207ENST00000515311 FAM221BA6H8Z2 402 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 TK2O00142 265 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 PRPF4O43172 522 aaKnown RBP eCLIP20.37■□□□□ 0.85
LSM6-207ENST00000515311 SPAG7O75391 227 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 SYF2O95926 243 aaKnown RBP20.37■□□□□ 0.85
LSM6-207ENST00000515311 ERGP11308 486 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 CKMT2P17540 419 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 PKLRP30613 574 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 KCNC1P48547 511 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 HNMTP50135 292 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 RAB28P51157 221 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 EPHA4P54764 986 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 DAB2P98082 770 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 PLCL1Q15111 1095 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 TMEM151AQ8N4L1 468 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 PDPRQ8NCN5 879 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 NETO1Q8TDF5 533 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 LCN9Q8WX39 176 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 SLC38A3Q99624 504 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 EPB41L1Q9H4G0 881 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 UTP6Q9NYH9 597 aaKnown RBP20.37■□□□□ 0.85
LSM6-207ENST00000515311 NUDT4Q9NZJ9 180 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 LNPEPQ9UIQ6 1025 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 TMCO1Q9UM00 188 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 ICKQ9UPZ9 632 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 PLLPQ9Y342 182 aa20.37■□□□□ 0.85
LSM6-207ENST00000515311 TARM1B6A8C7 271 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 PLIN3O60664 434 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 SLC16A8O95907 504 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 PROCP04070 461 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 ANXA5P08758 320 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 MYF5P13349 255 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 CYP2A13Q16696 494 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 ANKS6Q68DC2 871 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 C16orf46Q6P387 395 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 GUSBP11Q6P575 273 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 TCAIMQ8N3R3 496 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 HMGCLL1Q8TB92 370 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 RDH11Q8TC12 318 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 DENND1AQ8TEH3 1009 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 ATL1Q8WXF7 558 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 CCDC74AQ96AQ1 378 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 FBXL8Q96CD0 374 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 MED4Q9NPJ6 270 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 OR6C2Q9NZP2 312 aa20.36■□□□□ 0.85
LSM6-207ENST00000515311 CPED1A4D0V7 1026 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 KRT87PA6NCN2 255 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 ZNF839A8K0R7 811 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 SUPT3HB4E1H0 165 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 TM9SF1O15321 606 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 ZW10O43264 779 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 SUPT3HO75486 399 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 S100BP04271 92 aaPredicted RBP20.35■□□□□ 0.85
LSM6-207ENST00000515311 SBK3P0C264 359 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 MTHFD2P13995 350 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 ACP1P24666 158 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 SLC18A1P54219 525 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 GPS2Q13227 327 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 MBOAT1Q6ZNC8 495 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 EFL1Q7Z2Z2 1120 aaKnown RBP20.35■□□□□ 0.85
LSM6-207ENST00000515311 AMIGO1Q86WK6 493 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 KIAA2013Q8IYS2 634 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 OR2L8Q8NGY9 312 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 TCP10LQ8TDR4 215 aa20.35■□□□□ 0.85
LSM6-207ENST00000515311 ZNF480Q8WV37 535 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms