RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 APOBEC4Q8WW27 367 aaKnown RBP23.67■■□□□ 1.38
SNF8-213ENST00000514929 LPGAT1Q92604 370 aa23.67■■□□□ 1.38
SNF8-213ENST00000514929 TCTN2Q96GX1 697 aa23.67■■□□□ 1.38
SNF8-213ENST00000514929 TRIM56Q9BRZ2 755 aaKnown RBP23.67■■□□□ 1.38
SNF8-213ENST00000514929 GPR87Q9BY21 358 aa23.67■■□□□ 1.38
SNF8-213ENST00000514929 FAM117AQ9C073 453 aa23.67■■□□□ 1.38
SNF8-213ENST00000514929 SLC7A5P2Q9GIP4 190 aa23.67■■□□□ 1.38
SNF8-213ENST00000514929 STARD5Q9NSY2 213 aa23.67■■□□□ 1.38
SNF8-213ENST00000514929 CIDEBQ9UHD4 219 aa23.67■■□□□ 1.38
SNF8-213ENST00000514929 FAM237BA0A1B0GVD1 139 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 H3BMM5 538 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 OGNP20774 298 aaKnown RBP23.66■■□□□ 1.38
SNF8-213ENST00000514929 PKLRP30613 574 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 ITGA1P56199 1179 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 ANKRD20A4Q4UJ75 823 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 PLEKHS1Q5SXH7 462 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 NEPROQ6NW34 567 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 LRFN5Q96NI6 719 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 BIRC8Q96P09 236 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 TWSG1Q9GZX9 223 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 SLC25A18Q9H1K4 315 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 ACTL8Q9H568 366 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 ACTR5Q9H9F9 607 aaPredicted RBP23.66■■□□□ 1.38
SNF8-213ENST00000514929 CRYL1Q9Y2S2 319 aa23.66■■□□□ 1.38
SNF8-213ENST00000514929 HEMK1Q9Y5R4 338 aaPredicted RBP23.66■■□□□ 1.38
SNF8-213ENST00000514929 CDC14CA4D256 554 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 E7EQ34 232 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 MEN1O00255 615 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 ESR1P03372 595 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 TCP1P17987 556 aaKnown RBP23.65■■□□□ 1.38
SNF8-213ENST00000514929 SLC5A12Q1EHB4 618 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 ZNF789Q5FWF6 425 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 GPR135Q8IZ08 494 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 NAT8LQ8N9F0 302 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 FLVCR1-AS1Q8TAF5 88 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 FAM136AQ96C01 138 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 RUFY1Q96T51 708 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 FAM60AQ9NP50 221 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 IL1RAPL1Q9NZN1 696 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 TUBD1Q9UJT1 453 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 SLC39A10Q9ULF5 831 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 POLHQ9Y253 713 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 VPS9D1Q9Y2B5 631 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 MRFAP1Q9Y605 127 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 MAD1L1Q9Y6D9 718 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 ZNF462Q96JM2 2506 aa23.65■■□□□ 1.38
SNF8-213ENST00000514929 NIPSNAP2O75323 286 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 RECKO95980 971 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 FURINP09958 794 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 CHRM3P20309 590 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 CD9P21926 228 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 PTPN4P29074 926 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 PEBP1P30086 187 aaKnown RBP23.64■■□□□ 1.37
SNF8-213ENST00000514929 THOC5Q13769 683 aaKnown RBP23.64■■□□□ 1.37
SNF8-213ENST00000514929 CENPUQ71F23 418 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 CILP2Q8IUL8 1156 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 PPIL6Q8IXY8 311 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 DSELQ8IZU8 1212 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 C2orf73Q8N5S3 287 aaPredicted RBP23.64■■□□□ 1.37
SNF8-213ENST00000514929 LINC01555Q8NAE3 123 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 SEC14L1Q92503 715 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 RAD51AP1Q96B01 352 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 SLC22A18Q96BI1 424 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 FOPNLQ96NB1 174 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 IL17FQ96PD4 163 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 CHST8Q9H2A9 424 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 NFS1Q9Y697 457 aa23.64■■□□□ 1.37
SNF8-213ENST00000514929 BOD1L1Q8NFC6 3051 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 GCN1Q92616 2671 aaKnown RBP23.63■■□□□ 1.37
SNF8-213ENST00000514929 USP27XA6NNY8 438 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 ADARP55265 1226 aaKnown RBP23.63■■□□□ 1.37
SNF8-213ENST00000514929 RPS18P62269 152 aaKnown RBP23.63■■□□□ 1.37
SNF8-213ENST00000514929 GRB7Q14451 532 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 ZIC1Q15915 447 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 DEFB110Q30KQ9 67 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 ZNF470Q6ECI4 717 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 CNSTQ6PJW8 725 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 PRICKLE2Q7Z3G6 844 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 TMEM135Q86UB9 458 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 TAX1BP1Q86VP1 789 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 LMNTD1Q8N9Z9 388 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 OR2L8Q8NGY9 312 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 MENTQ9BUN1 341 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 RAB11FIP5Q9BXF6 653 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 CHRNA10Q9GZZ6 450 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 DDX47Q9H0S4 455 aaKnown RBP23.63■■□□□ 1.37
SNF8-213ENST00000514929 PCMTD2Q9NV79 361 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 INTS10Q9NVR2 710 aaKnown RBP23.63■■□□□ 1.37
SNF8-213ENST00000514929 ASIC3Q9UHC3 531 aa23.63■■□□□ 1.37
SNF8-213ENST00000514929 TSR3Q9UJK0 312 aaKnown RBP23.63■■□□□ 1.37
SNF8-213ENST00000514929 RUVBL2Q9Y230 463 aaKnown RBP23.63■■□□□ 1.37
SNF8-213ENST00000514929 FARSAQ9Y285 508 aaKnown RBP23.63■■□□□ 1.37
SNF8-213ENST00000514929 CTAGE9A4FU28 777 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 E5RI56 91 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 RASGRF2O14827 1237 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 ZNF749O43361 778 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 SLC28A2O43868 658 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 OR2B3O76000 313 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 HBQ1P09105 142 aa23.62■■□□□ 1.37
SNF8-213ENST00000514929 PKMP14618 531 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms