RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 ASF1AQ9Y294 204 aa19.63■□□□□ 0.73
USP53-208ENST00000514305 UNC13CQ8NB66 2214 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 A6NCN8 305 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 RASGRF2O14827 1237 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 PLD2O14939 933 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 FAM155BO75949 473 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 MTHFD1P11586 935 aaKnown RBP19.62■□□□□ 0.73
USP53-208ENST00000514305 TYK2P29597 1187 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 PREPP48147 710 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 INHBCP55103 352 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 CDKN2DP55273 166 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 TAS2R39P59534 338 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 RHDQ02161 417 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 HHEXQ03014 270 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 RPE65Q16518 533 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 RAB11FIP2Q7L804 512 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 CLEC14AQ86T13 490 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 TBC1D21Q8IYX1 336 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 PHC3Q8NDX5 983 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 KCTD12Q96CX2 325 aaKnown RBP19.62■□□□□ 0.73
USP53-208ENST00000514305 PKNOX2Q96KN3 472 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 TSNARE1Q96NA8 513 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 FERD3LQ96RJ6 166 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 EPB41L4BQ9H329 900 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 TRIT1Q9H3H1 467 aaKnown RBP19.62■□□□□ 0.73
USP53-208ENST00000514305 LRRN3Q9H3W5 708 aa19.62■□□□□ 0.73
USP53-208ENST00000514305 IMP3Q9NV31 184 aaKnown RBP19.62■□□□□ 0.73
USP53-208ENST00000514305 ARHGEF17Q96PE2 2063 aaPredicted RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 PMS2P1A4D2B8 440 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 ZBTB14O43829 449 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 NOBOXO60393 691 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 CATP04040 527 aaKnown RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 F7P08709 466 aaPredicted RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 MAP4P27816 1152 aaKnown RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 PDHA2P29803 388 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 SLC26A3P40879 764 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 GPR3P46089 330 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 VAC14Q08AM6 782 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 GBX1Q14549 363 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 CLCA4Q14CN2 919 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 PAQR3Q6TCH7 311 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 B3GNT8Q7Z7M8 397 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 TBC1D1Q86TI0 1168 aaPredicted RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 C17orf82Q86X59 251 aaPredicted RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 FBXO39Q8N4B4 442 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 LILRA3Q8N6C8 439 aaPredicted RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 Q8N9G6 341 aaPredicted RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 SLC37A2Q8TED4 501 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 DCAKDQ8WVC6 231 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 ANKRD7Q92527 254 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 PDLIM5Q96HC4 596 aaKnown RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 RUFY1Q96T51 708 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 INSM2Q96T92 566 aaPredicted RBP19.61■□□□□ 0.73
USP53-208ENST00000514305 SLC38A3Q99624 504 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 DHRS4Q9BTZ2 278 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 TRIM54Q9BYV2 358 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 EPB41L1Q9H4G0 881 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 UCK1Q9HA47 277 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 LRIT1Q9P2V4 623 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 CDYLQ9Y232 598 aa19.61■□□□□ 0.73
USP53-208ENST00000514305 TRBV23OR9-2A0A075B6M9 112 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 A0A087X1B8 175 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 A0A1W2PQM1 296 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 JMJD7P0C870 316 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 BRAFP15056 766 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 SLC19A1P41440 591 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 ABRQ12979 859 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 ACSBG2Q5FVE4 666 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 UBAP2Q5T6F2 1119 aaKnown RBP19.6■□□□□ 0.73
USP53-208ENST00000514305 KLHL35Q6PF15 583 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 NAPRTQ6XQN6 538 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 CPNE9Q8IYJ1 553 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 OLFM1Q99784 485 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 WDR70Q9NW82 654 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 PLAAQ9Y263 795 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 WDR37Q9Y2I8 494 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 MED16Q9Y2X0 877 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 ACOT9Q9Y305 439 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 MGAQ8IWI9 3026 aa19.6■□□□□ 0.73
USP53-208ENST00000514305 CCDC189A1A4V9 331 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 OR52A4PA6NMU1 304 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 SLC16A5O15375 505 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 C8GP07360 202 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 HIST1H2AGP0C0S8 130 aaPredicted RBP19.59■□□□□ 0.73
USP53-208ENST00000514305 ZNF37AP17032 561 aaPredicted RBP19.59■□□□□ 0.73
USP53-208ENST00000514305 HIST1H2ADP20671 130 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 CYP2A7P20853 494 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 ACADLP28330 430 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 CCKBRP32239 447 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 ATP6V0D1P61421 351 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 ZKSCAN8Q15776 578 aaPredicted RBP19.59■□□□□ 0.73
USP53-208ENST00000514305 BEND6Q5SZJ8 279 aaPredicted RBP19.59■□□□□ 0.73
USP53-208ENST00000514305 DCUN1D3Q8IWE4 304 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 OR5K2Q8NHB8 316 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 CFAP61Q8NHU2 1237 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 RAD51AP1Q96B01 352 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 LINGO1Q96FE5 620 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 HIST1H2AHQ96KK5 128 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 RMDN2Q96LZ7 410 aa19.59■□□□□ 0.73
USP53-208ENST00000514305 HIST1H2AJQ99878 128 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms